Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0870
Help
Entry
HDEF_0870 CDS
T00911
Symbol
ruvC
Name
(GenBank) Holliday junction nuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HDEF_0870 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_0870 (ruvC)
Enzymes [BR:
hde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
HDEF_0870 (ruvC)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HDEF_0870 (ruvC)
RecFOR pathway proteins
HDEF_0870 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
RRXRR
Motif
Other DBs
NCBI-ProteinID:
ACQ67590
UniProt:
C4K4U7
LinkDB
All DBs
Position
889654..890133
Genome browser
AA seq
159 aa
AA seq
DB search
MPIILGIDPGSRITGYGVISEKKNQLIYLGSGCIRTLDNGLPHKLKLIYAGVTEIISQFR
PDFFCIEQVFMSKNADSALKLGQARGVAIVAAANQNLPVFEYAARQVKQTVVGNGAADKK
QVQHMVRYLLKLPSAPNTDAADALAIAITHSHLYAFHAH
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcattttagggatcgaccccggttctcgtatcaccggctatggggtgatctct
gagaaaaaaaatcaactgatttacctgggcagtggctgcatccgcactttagataacgga
ttaccccataaattaaagctgatttatgcgggggtgacagaaattatttctcaatttagg
cctgattttttttgtatagaacaggtttttatgtcaaaaaacgcggactcggcgttaaaa
ttaggccaagcgcgaggggtcgctatagtcgcggcggccaatcagaatttgcctgtattt
gaatatgccgccaggcaagtaaaacaaaccgtggttggcaacggtgctgcggataaaaaa
caagttcagcacatggttcgttatctattaaaactcccctctgcgccaaacaccgacgca
gccgacgccttggcaatagcgattacgcattctcatctttacgcatttcacgcacattaa
DBGET
integrated database retrieval system
