KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1282
Entry
HDEF_1282         CDS       T00911                                 
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HDEF_1282 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_1282 (xseA)
Enzymes [BR:hde01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     HDEF_1282 (xseA)
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HDEF_1282 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ACQ67934
UniProt: C4K5U1
LinkDB
Position
complement(1184399..1185745)
AA seq 448 aa
MPLSHFSDLLTVSQLNIRVRDILEKNIGQIWLMAEISNFSQPSSGHWYFTLKDERTQVRC
TMFRNNNRHIFFKVQNGLQVLVRACVSLYEPRGEYQLIVESMEPAGEGILRQKFEQLKKK
LAAEGLFAEKYKKPLPDSVKQLGVITSISGAALFDILKVLQHRDPSLPVVIYPTKVQGEY
APSQIVKALSIANRRAECDLVILARGGGSLEDLSCFNDERVARAIFDSDLPIVSAIGHET
DVSIADLVADLRASTPSAAAERVTRDRRDIIQKLGSHQQRMAMAMDYYFSKLRQRFVHLS
HCIEQQHPQLELERQKMQLIHFKISMEKIIQAKLKGLIHQEAHLKKNVLRRAPQIQIYQY
QKQIQEEFHQLKAAMERKIHHYVQRFAVVSSRLETVSPLATLARGYSVTCFSSGSMLKKI
EQVQIGDELNTRLQGGWIKSQVLEIKKN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgccactttctcatttctctgatcttttgacagtcagtcaactcaatatccgtgttcgt
gacatattggaaaaaaacataggtcaaatttggctgatggctgaaatttctaatttttct
caaccttcttcgggtcactggtattttacgttaaaggatgaacgaacacaggtgcgctgc
actatgttccgtaataacaatcgccatatttttttcaaagtacaaaatggactgcaggtg
cttgtacgcgcttgtgtcagtctttatgagcccagaggagaatatcaactgattgtggaa
agcatggaaccggccggtgaagggatactgcgtcagaaatttgaacagttaaaaaaaaaa
ttggccgcagaagggctgtttgcagaaaaatacaaaaaaccccttcctgattcggtgaag
cagctgggggtcattacttcgatcagtggtgctgctttgttcgacattttaaaagtatta
caacaccgtgacccttctttgcctgtggtgatttatccgaccaaggtgcagggggaatat
gccccctcccagattgtcaaagcgctcagcattgcaaatcggcgtgcggaatgcgatctg
gttattttggcgcgagggggcggttctcttgaagatttatcctgttttaatgatgagaga
gtggctcgcgccatttttgatagcgacctcccgattgtcagtgcgattgggcatgaaaca
gatgtgagtattgccgatttggttgcagatctccgtgcttccacgccttctgctgcagct
gagcgggtcacaagagataggagagacatcatccagaagcttggatcacaccagcaacgc
atggcaatggccatggattactatttttcaaagctgcgccaacgatttgtgcatctgagc
cattgtattgagcaacagcatccacagctggaattagagcgacaaaaaatgcagttgata
cattttaaaatcagcatggaaaaaatcattcaagcaaagctgaaggggttaatacatcaa
gaagctcacctcaaaaaaaacgtattacgtcgagctccccagatccagatttatcagtat
caaaagcaaatacaagaagagtttcatcaactgaaagcggccatggaaagaaaaatacat
cattatgtacaacgttttgcggtggtatccagccgattggaaacggtcagtccactggcg
actttagcaagaggttatagtgtaacgtgtttttcttctggatctatgctgaaaaaaatt
gagcaggtgcaaataggggatgaattaaacactcgattacaaggaggttggataaaaagc
caggttttagagattaaaaaaaattaa

KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1606
Entry
HDEF_1606         CDS       T00911                                 
Symbol
xseB
Name
(GenBank) exonuclease VII small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HDEF_1606 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_1606 (xseB)
Enzymes [BR:hde01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     HDEF_1606 (xseB)
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HDEF_1606 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S TMCO5 SHOCT-like_DUF2089-C Sec15_C Caskin-tail DUF6687 CYAA_C
Other DBs
NCBI-ProteinID: ACQ68218
UniProt: C4K6M5
LinkDB
Position
1452915..1453205
AA seq 96 aa
MPKLTSASSDFSEKKKSKIKKNASISFETALNDLEQVVTRLESGNLSLEEALNEFERGIK
LTKQTQKTLLEAEQHVKILLSDTPDAKLNPFTLDSE
NT seq 291 nt   +upstreamnt  +downstreamnt
atgccaaaattaacctctgcaagctcagacttttctgagaaaaaaaaatccaaaataaaa
aaaaatgcctcgatcagttttgaaaccgccttaaatgatttggagcaggttgttactcgc
ctggagtcgggcaatctttcattagaagaagccctcaatgaattcgaacgaggcatcaaa
ttaacaaaacaaacgcaaaaaacgttgttagaggcagaacaacatgtaaaaattttactc
agcgatacccctgatgcgaaattaaatccgttcacccttgattctgagtaa

DBGET integrated database retrieval system