Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1628
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Entry
HDEF_1628 CDS
T00911
Symbol
mutS
Name
(GenBank) methyl-directed mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HDEF_1628 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_1628 (mutS)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HDEF_1628 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACQ68240
UniProt:
C4K6P7
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Position
1480073..1482637
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AA seq
854 aa
AA seq
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MDSINKCESHTPMMQQYLRLKSEHPEVFLFYRMGDFYELFYDDAKRASRLLDISLTQRGQ
SAGTPIPMAGVPYHVIDNYLAKLVQLGESAAICEQVGDPSTSKGPVERKVVRIVTPGTIS
DEALLQEKQDNLLAAVWQDKQGLGYATLDISSGRFRAMEPKDLEALKTELQRTHPSELLY
PETFELIDLIESRQGLRRRPLWEFELETARQQLNLQFGTQDLTGFGVEQAHLALRAAGCL
LQYVKDTQRTSLPHIRELILQHEEDNVTIDAASRRNLELTENLSGGTENTLASILDCTVT
SMGSRMLKRWLHMPITDMSTLHHRQEAIRVLQHVASDLKPLLRKVGDLERILARLALRTA
RPRDLARMRLAFEQLPEIHDVLNTCKSQHLKKLLSEIGQFDALLDLLRRAIVDVPPVLIR
DGGVIATGYNEELDKWRALSDGAHDYLNELEIRERHELKLDTLKVGFNAIHGYYIQVSRA
QSHLIPAHYARRQTLKNVERYIIPELKEYEDKVLTSKGKALSIEKDLYEEIFDLLLPHIA
SLQTSSTALAELDVLSNLAERADTLNYVCPVLTEKSVIEITGGRHPVVEQVSKQPFIANP
ISLSPERRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPADKAIIGSVDRIFTRIGAA
DDLASGRSTFMVEMTETANILHNATEKSLVLMDEIGRGTSTYDGLSLAWACAENLSIHIK
SMTLFATHYFELTSLPEKINGIVNVHLQALEQGDEIAFMHSVHEGAASKSYGLAVAALAG
VPKKVIDRARQRLEELEFTLEENGHTKPSLPASKPVFEKESTDHPVIRKLKTLKPDTMTP
YDALQWIYYLQKMF
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacagtatcaataaatgtgaatctcataccccaatgatgcagcaatacctacggctt
aaatctgaacatccagaggtatttttgttttatcgaatgggcgatttttatgaattgttt
tatgacgatgccaaacgcgcttccagattactggatatttcattgactcaacgcgggcaa
tctgcaggcacacctattcccatggcaggcgtgccctatcatgtcatcgataattattta
gcaaaacttgttcaattaggtgaatctgcggctatttgtgaacaggtaggagatccttca
acgagcaaagggcctgttgaacgcaaggtcgttcgtatcgtgacgcctggcaccatcagt
gatgaagcattattgcaggagaaacaagataatttgctggccgctgtctggcaagacaaa
caaggtttgggttatgccaccttagatatcagttcagggcgctttcgagcaatggaacca
aaagacctcgaagccttaaaaaccgaattacaacgtactcatccctctgaattactctat
cccgaaacctttgagctcattgatttgattgaatcccgtcaaggtttgcgtcgccgccct
ttatgggaatttgagctcgaaacggcccgtcaacagctcaatctacaatttggtacacaa
gatttaacgggctttggtgtagaacaggcacatttggctttaagagcagcaggctgctta
ctgcaatatgtcaaagatacacaacgtacttcgttacctcacatcagagaactgatcctg
caacacgaggaagacaatgtcaccatagatgctgccagcaggcgtaatttagaattaact
gaaaatttatcagggggtacagaaaatacgctggccagtattttggattgtacggtgacg
tctatggggagtcgaatgttaaagcgttggcttcatatgcccataacagatatgagcaca
ctgcatcatcgacaagaagccatcagggtattacagcatgtggcttctgatttaaaaccg
cttttacgtaaagtcggtgatttagaacgtattcttgcccggctcgcattgcgtaccgca
cggccaagagatttagccagaatgcgcttggcttttgagcagttacctgaaattcatgac
gtattaaatacgtgtaaatctcaacatttaaaaaaattgttatctgaaataggtcaattt
gatgcattacttgatttactgcggcgagcgatagtagacgttccccctgtattaatacgg
gatggaggcgttattgccacaggatataacgaagaattagataaatggcgcgcactatct
gatggcgctcatgattatttaaatgaactcgaaatacgtgagcgtcatgagttaaaacta
gataccctaaaagtaggatttaacgccatacatggctactatattcaggtgagtcgtgcc
caaagtcatttgattcccgctcattatgctcggcgtcaaacactgaaaaacgtcgaacgc
tacatcattcctgaattaaaagaatatgaagataaggtgctcacctccaaaggaaaggca
ttaagcatagaaaaagatctctatgaagaaatttttgatttgttgctacctcatattgcc
tcattacaaacgagttctaccgcgctggctgaattagatgtgctttctaatctggctgaa
agagcagatacactcaactatgtttgccctgttttgactgaaaaatccgtgattgaaatt
acgggtgggcgccatccagtggtagagcaggtttcaaaacaaccttttattgccaacccc
atttctttgtctcctgagcgccggatgttgatcatcacaggtcctaacatgggtgggaaa
agtacttatatgcgccaaacggcactgattgtattgttggcacacatcggaagttttgta
cccgctgacaaagccatcattggatccgttgatcgtatttttactcgtattggcgcggca
gatgatctggcttcaggccgttctacctttatggttgaaatgaccgaaaccgcgaatatt
ttacataatgccacggagaaaagtttggtcttgatggatgaaatcgggcgggggacttcc
acctatgatggcctttctctggcttgggcttgtgccgaaaatttgtctatccacattaaa
tccatgacgctttttgccactcattattttgaattgacaagcttaccagaaaaaatcaac
ggcatagtgaacgttcatcttcaagctttggagcaaggagatgagattgcgtttatgcat
tctgttcatgaaggtgctgcaagcaaaagttatggtttagccgtcgctgctttagcgggc
gtgccaaagaaagtcatcgatagggctcgtcaaagattagaggagctggaatttacttta
gaagagaacgggcatacgaaaccatccctccctgcttcaaagcctgtttttgaaaaagag
tctacggatcatcctgttattcgtaaattaaaaaccttaaagccagatacgatgacaccg
tatgatgcattacagtggatatattatttacaaaagatgttttaa
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