KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1628
Entry
HDEF_1628         CDS       T00911                                 
Symbol
mutS
Name
(GenBank) methyl-directed mismatch repair protein
  KO
K03555  DNA mismatch repair protein MutS
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HDEF_1628 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_1628 (mutS)
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HDEF_1628 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_14
Other DBs
NCBI-ProteinID: ACQ68240
UniProt: C4K6P7
LinkDB
Position
1480073..1482637
AA seq 854 aa
MDSINKCESHTPMMQQYLRLKSEHPEVFLFYRMGDFYELFYDDAKRASRLLDISLTQRGQ
SAGTPIPMAGVPYHVIDNYLAKLVQLGESAAICEQVGDPSTSKGPVERKVVRIVTPGTIS
DEALLQEKQDNLLAAVWQDKQGLGYATLDISSGRFRAMEPKDLEALKTELQRTHPSELLY
PETFELIDLIESRQGLRRRPLWEFELETARQQLNLQFGTQDLTGFGVEQAHLALRAAGCL
LQYVKDTQRTSLPHIRELILQHEEDNVTIDAASRRNLELTENLSGGTENTLASILDCTVT
SMGSRMLKRWLHMPITDMSTLHHRQEAIRVLQHVASDLKPLLRKVGDLERILARLALRTA
RPRDLARMRLAFEQLPEIHDVLNTCKSQHLKKLLSEIGQFDALLDLLRRAIVDVPPVLIR
DGGVIATGYNEELDKWRALSDGAHDYLNELEIRERHELKLDTLKVGFNAIHGYYIQVSRA
QSHLIPAHYARRQTLKNVERYIIPELKEYEDKVLTSKGKALSIEKDLYEEIFDLLLPHIA
SLQTSSTALAELDVLSNLAERADTLNYVCPVLTEKSVIEITGGRHPVVEQVSKQPFIANP
ISLSPERRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPADKAIIGSVDRIFTRIGAA
DDLASGRSTFMVEMTETANILHNATEKSLVLMDEIGRGTSTYDGLSLAWACAENLSIHIK
SMTLFATHYFELTSLPEKINGIVNVHLQALEQGDEIAFMHSVHEGAASKSYGLAVAALAG
VPKKVIDRARQRLEELEFTLEENGHTKPSLPASKPVFEKESTDHPVIRKLKTLKPDTMTP
YDALQWIYYLQKMF
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggacagtatcaataaatgtgaatctcataccccaatgatgcagcaatacctacggctt
aaatctgaacatccagaggtatttttgttttatcgaatgggcgatttttatgaattgttt
tatgacgatgccaaacgcgcttccagattactggatatttcattgactcaacgcgggcaa
tctgcaggcacacctattcccatggcaggcgtgccctatcatgtcatcgataattattta
gcaaaacttgttcaattaggtgaatctgcggctatttgtgaacaggtaggagatccttca
acgagcaaagggcctgttgaacgcaaggtcgttcgtatcgtgacgcctggcaccatcagt
gatgaagcattattgcaggagaaacaagataatttgctggccgctgtctggcaagacaaa
caaggtttgggttatgccaccttagatatcagttcagggcgctttcgagcaatggaacca
aaagacctcgaagccttaaaaaccgaattacaacgtactcatccctctgaattactctat
cccgaaacctttgagctcattgatttgattgaatcccgtcaaggtttgcgtcgccgccct
ttatgggaatttgagctcgaaacggcccgtcaacagctcaatctacaatttggtacacaa
gatttaacgggctttggtgtagaacaggcacatttggctttaagagcagcaggctgctta
ctgcaatatgtcaaagatacacaacgtacttcgttacctcacatcagagaactgatcctg
caacacgaggaagacaatgtcaccatagatgctgccagcaggcgtaatttagaattaact
gaaaatttatcagggggtacagaaaatacgctggccagtattttggattgtacggtgacg
tctatggggagtcgaatgttaaagcgttggcttcatatgcccataacagatatgagcaca
ctgcatcatcgacaagaagccatcagggtattacagcatgtggcttctgatttaaaaccg
cttttacgtaaagtcggtgatttagaacgtattcttgcccggctcgcattgcgtaccgca
cggccaagagatttagccagaatgcgcttggcttttgagcagttacctgaaattcatgac
gtattaaatacgtgtaaatctcaacatttaaaaaaattgttatctgaaataggtcaattt
gatgcattacttgatttactgcggcgagcgatagtagacgttccccctgtattaatacgg
gatggaggcgttattgccacaggatataacgaagaattagataaatggcgcgcactatct
gatggcgctcatgattatttaaatgaactcgaaatacgtgagcgtcatgagttaaaacta
gataccctaaaagtaggatttaacgccatacatggctactatattcaggtgagtcgtgcc
caaagtcatttgattcccgctcattatgctcggcgtcaaacactgaaaaacgtcgaacgc
tacatcattcctgaattaaaagaatatgaagataaggtgctcacctccaaaggaaaggca
ttaagcatagaaaaagatctctatgaagaaatttttgatttgttgctacctcatattgcc
tcattacaaacgagttctaccgcgctggctgaattagatgtgctttctaatctggctgaa
agagcagatacactcaactatgtttgccctgttttgactgaaaaatccgtgattgaaatt
acgggtgggcgccatccagtggtagagcaggtttcaaaacaaccttttattgccaacccc
atttctttgtctcctgagcgccggatgttgatcatcacaggtcctaacatgggtgggaaa
agtacttatatgcgccaaacggcactgattgtattgttggcacacatcggaagttttgta
cccgctgacaaagccatcattggatccgttgatcgtatttttactcgtattggcgcggca
gatgatctggcttcaggccgttctacctttatggttgaaatgaccgaaaccgcgaatatt
ttacataatgccacggagaaaagtttggtcttgatggatgaaatcgggcgggggacttcc
acctatgatggcctttctctggcttgggcttgtgccgaaaatttgtctatccacattaaa
tccatgacgctttttgccactcattattttgaattgacaagcttaccagaaaaaatcaac
ggcatagtgaacgttcatcttcaagctttggagcaaggagatgagattgcgtttatgcat
tctgttcatgaaggtgctgcaagcaaaagttatggtttagccgtcgctgctttagcgggc
gtgccaaagaaagtcatcgatagggctcgtcaaagattagaggagctggaatttacttta
gaagagaacgggcatacgaaaccatccctccctgcttcaaagcctgtttttgaaaaagag
tctacggatcatcctgttattcgtaaattaaaaaccttaaagccagatacgatgacaccg
tatgatgcattacagtggatatattatttacaaaagatgttttaa

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