Hyphomicrobium denitrificans ATCC 51888: Hden_0392
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Entry
Hden_0392 CDS
T01265
Name
(GenBank) domain of unknown function DUF1730
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_0392
Enzymes [BR:
hdn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
Hden_0392
Transfer RNA biogenesis [BR:
hdn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Hden_0392
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Paralog
Gene cluster
GFIT
Motif
Pfam:
QueG_DUF1730
Fer4_16
LdpA_Fe-S-bd
Fer4_9
HEAT_2
Fer4_7
Fer4_10
Fer4_8
Fer4_6
Fer4_21
Fer4
HEAT
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
ADJ22214
UniProt:
D8JRI5
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Position
complement(400343..401494)
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AA seq
383 aa
AA seq
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MLDSVTAATDLNVMLRDEARKLGLDAIGIARLDASGELAERLDYFLKHGRHGDMDWMEEN
ADRRGDPNRLWPEAKSAIMIGQSYAPPDNPLDALAERDRGVISVYAKGRDYHDVVKKKIK
SLARTFAAKSGADVKVFVDTAPLMEKPLAMRAGLGWQGKHTVLVSREHGDWLFLGAILTT
AALAPDAEEVSRCGSCTRCLDICPTKAFPAPYQLDARRCLAYLSIEHKGHIPLEFREPMG
NRVFGCDDCLAVCPWNKFASAATEIRFAAQPATDNPPLTDLLALDDAAFRQRFAGTPVKR
TGRNRIIRNTLIAAGNSGDRSLLRLITPLFEDESPLVRAMAIWSAKRLMREEEFAPFKSR
YEAREADPDVAREWAQPLEGHSA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgatagcgttaccgccgcaactgacctgaacgtcatgctccgcgacgaggcgcgc
aagctcggcctcgacgctatcggcatcgcgcggctcgacgcctcgggcgagcttgccgaa
cggctcgattattttctgaaacatggccgccacggcgacatggactggatggaagagaac
gccgaccggcgcggcgatcccaatcgcctttggccggaagcgaaaagcgcgatcatgatc
ggccagtcttacgcgccgcccgacaacccgctcgatgcccttgccgagcgcgaccgcggt
gtcatctcggtctatgcgaagggccgcgactaccacgacgtcgtgaagaaaaaaatcaaa
tcactggcgcgcaccttcgcggcgaaatcgggcgccgacgtcaaggtcttcgtcgacacc
gctccattgatggagaagccgctcgcgatgagggcgggcctcggctggcagggcaaacat
acagttcttgtttcgcgcgagcatggcgactggctctttctcggcgcgatcctgacgacg
gcggccctcgcaccggatgccgaagaagtcagccgctgcggctcctgcacgcgttgtctc
gacatctgcccgacgaaggcgtttccggctccgtatcagctcgatgcacgccgctgtctc
gcctacctgtcaatcgagcacaaaggtcatatcccgctggaatttcgcgagccgatgggc
aatcgcgtattcggctgcgacgactgcctcgccgtctgcccgtggaataaatttgcctcc
gccgcgaccgagatccgcttcgccgcgcagcccgcgaccgacaacccgccgcttaccgat
ctgctggcgctcgacgatgccgcgtttcgccaacgctttgcgggaacgccggtgaaacgc
acgggacgcaaccgcatcatccgcaacacgcttatcgcagctggaaactccggcgatcga
tcgttgctgcgcttgatcacaccgctattcgaagacgagtctccgcttgttcgcgccatg
gcgatctggtcggcaaaacgtctgatgcgcgaagaagagttcgcaccctttaaatcccgc
tacgaagcgcgcgaagccgatcccgatgtcgcgcgcgaatgggctcagcccctcgaagga
cattccgcatga
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