Hyphomicrobium denitrificans ATCC 51888: Hden_0989
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Entry
Hden_0989 CDS
T01265
Name
(GenBank) isopentenyl-diphosphate delta-isomerase, type 1
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00900
Terpenoid backbone biosynthesis
hdn01100
Metabolic pathways
hdn01110
Biosynthesis of secondary metabolites
Module
hdn_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
hdn_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Hden_0989
Enzymes [BR:
hdn01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
Hden_0989
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ADJ22803
UniProt:
D8JUY7
LinkDB
All DBs
Position
complement(1044805..1045335)
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AA seq
176 aa
AA seq
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MLQEEIVLVDRDDNEIGIAEKLETHRRGDLHRAFSVLIWDSAGRLLLQRRQIGKYHSGGL
WTNSCCGHPRPGERSGDAALRRLGEEMGFACALAPIGTFLYRAELDDGLVEHELVHLFRG
TYDGPIAPNPEECDGFNWLAPDAIRREIAAAPETFTIWFRKYVEAGWPLSPPLEVA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggaagagatcgttctcgtcgatcgcgacgataacgaaatcggcatcgcggaa
aaactcgaaacgcatcggcggggtgacctgcaccgggcgttttccgtgctgatctgggat
agcgccggacgccttctgctgcagcgtcgccagatcggcaaatatcattcgggcgggctc
tggacgaactcctgctgcggccatcctcgtcccggcgagcgaagcggtgacgcggcgctg
cggcgtctcggcgaagagatgggctttgcgtgcgcgctggctccaatcggaacttttctc
tatcgcgccgaactcgatgacgggctggtcgagcacgagctggtgcatctttttcgcggc
acctacgatggccccatcgcgcccaatccggaagagtgcgacggcttcaactggctcgcc
ccggacgcgatccgccgggagatcgcagccgctccagaaacttttaccatctggttccgg
aagtacgtcgaggctggctggccgctatcgccgccgctcgaagtcgcctga
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