Hyphomicrobium denitrificans 1NES1: HYPDE_30163
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Entry
HYPDE_30163 CDS
T02646
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00010
Glycolysis / Gluconeogenesis
hdt00620
Pyruvate metabolism
hdt00630
Glyoxylate and dicarboxylate metabolism
hdt00640
Propanoate metabolism
hdt00680
Methane metabolism
hdt00720
Other carbon fixation pathways
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HYPDE_30163
00620 Pyruvate metabolism
HYPDE_30163
00630 Glyoxylate and dicarboxylate metabolism
HYPDE_30163
00640 Propanoate metabolism
HYPDE_30163
09102 Energy metabolism
00720 Other carbon fixation pathways
HYPDE_30163
00680 Methane metabolism
HYPDE_30163
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hdt01004
]
HYPDE_30163
Enzymes [BR:
hdt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
HYPDE_30163
Lipid biosynthesis proteins [BR:
hdt01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
HYPDE_30163
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CAK-anch_MAT1
Motif
Other DBs
NCBI-ProteinID:
AGK57707
UniProt:
N0B625
LinkDB
All DBs
Position
complement(1524604..1526145)
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AA seq
513 aa
AA seq
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MSPGTDLFNMAEYAIGRAAREMPEKTALLVYDVENPRDPLEAWTFAELDQAVRNLAAGLQ
DKGLQRGDRIGIRLGNSSQSALMFFAAMAGGFIALPLSDQLTASELVTLLEDSGAAVLAT
GDALPDTASRRTILAISPNDVAAMIAQNTNQGYVPTTRDDPAFLIYTSGTTARPKGVLHA
HRSALGRQPMYQGWYGIRPDDCMLHAGAFNWTFTLGVGLTDPWANGATAIVCTGDKKPEL
WPDVIAETGATLFAAVPGIYRQILKYAPPRRGSLGKLRHGLMAGETPPPGLIEDWTSATG
LPLYEALGMSEISTYISTGPSVPHKPGTVGKAQAGRRVVILAVEGNDQPLSPDSEGLIAV
HRSDPGLMLGYWKRPQEEAEVFRGEWFTGGDLGSIDDDGYITHLGRSNELMNAGGYRVSP
LEVEAAIACCPAVAEVACAEIRIRSDVSIIAAFVVAADGAVRDATAIKEFAKEHLAAYKI
PREVVFIDRLPRTPNGKVQRKALALPSGVDDTR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccagggaccgatctcttcaacatggccgagtacgcgatcggtcgagctgcccgc
gagatgccggaaaaaacggcgctgcttgtttacgatgtcgaaaatccgcgcgatccgttg
gaggcatggacgttcgccgaactcgaccaggccgtccgcaatctggcggcaggtcttcaa
gacaaaggcttgcagcgcggcgaccggatcgggatcaggcttggcaactcctcgcagtcc
gcgttgatgttttttgccgcaatggccgggggcttcatcgctctgccgctttcggatcaa
ctgactgcgtccgaacttgtgacacttctcgaagacagcggcgcagcagtgctcgcaact
ggggacgcgttgcccgataccgcgtcgcggcgcacgatccttgccatttctccgaatgac
gtcgcggccatgatcgcgcaaaatacgaaccagggttatgtaccgaccacgcgcgacgac
ccggcatttctgatctacacatcaggcacgacagcgcgcccgaaaggtgtcctccacgcg
catcgctcggcgctcggtcgacagccgatgtatcagggctggtatggcattcgccccgac
gattgcatgctgcatgcgggcgcatttaattggaccttcacgctcggagtcggcttgacc
gatccctgggcaaacggggcgacggccatcgtttgcacaggcgataaaaagccggagctc
tggccagacgtcatcgcagaaaccggtgctacgctgtttgcagccgtgccgggaatctat
cggcaaattctgaagtacgcgccgccaaggcgcggttcgcttggcaaattgcggcacggc
ttgatggcgggcgaaacgccgccgccgggattgatcgaggattggacgtcggcaaccggc
ctgccgctctatgaggccctcggcatgagcgaaatctcgacctacatttcgaccggcccg
tcagttccccataaacccggcacggtcggcaaggcgcaagccgggcgtcgcgtcgtcatc
ctagccgtcgaaggcaacgaccagccgctctctcccgatagcgaaggccttattgccgtg
catcgctcggaccctggcctgatgctcggctattggaagaggcctcaagaggaagccgaa
gtctttcgcggcgagtggttcaccggcggtgacctcggttcgatcgatgacgacggctac
atcacgcacctcggtcgctctaacgagctgatgaatgcgggaggctatcgtgtctcccct
ctcgaagtcgaagcggcaatcgcgtgctgtcccgctgttgcggaggtcgcctgcgcagag
atacgcataagaagtgatgtttcgattatcgctgcattcgtcgttgcggccgacggcgca
gtgcgtgacgctaccgcaatcaaggaattcgcgaaggaacatctcgccgcttacaagatc
ccgcgcgaggttgtgttcatcgaccggctgccacgcacgcccaacggcaaggttcaacgc
aaggctctcgcgttgccttctggggtcgatgacacgcgttaa
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