Hyphomicrobium denitrificans 1NES1: HYPDE_31823
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Entry
HYPDE_31823 CDS
T02646
Name
(GenBank) uracil-DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYPDE_31823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_31823
Enzymes [BR:
hdt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HYPDE_31823
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYPDE_31823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGK58039
UniProt:
N0B3G6
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All DBs
Position
1836359..1836958
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AA seq
199 aa
AA seq
DB search
MERERVPANLAELNDIIVAAKPMVHGGHKAVLGEGPIGAPLAFVGEQPGDQEDRQGRPFV
GPAGRLLDQALEAAGVERTSTYVTNAVKHFKYEQRGKRRIHQKPTVGEVKHYRWWLIKEL
EFVHPHLVVALGATAALALTGTTVTIGRARGPAQFGPFRGYITVHPSSLLRQTDEHSRAV
AYAAFVRDLRNAAELAAPF
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcgagcgtgtaccggcgaatctcgccgagttgaacgatataatcgttgccgcc
aagccgatggttcatggcggccacaaagccgtgctcggcgaaggtccgatcggcgctcca
ctcgcattcgtcggtgagcagcccggcgatcaggaagaccgacaaggccgcccattcgtt
ggaccagccggccggcttctcgatcaggcattagaagccgcaggtgttgaacggacgagc
acctatgtcaccaatgccgtcaaacacttcaaatacgagcagcgtggcaagcgccgcatc
catcagaaacccacggtcggcgaagtgaaacactatcgctggtggctcattaaagagctt
gaattcgtccacccgcatcttgtggtcgccctcggcgcgacagccgccttggcattaacc
ggcacaacagtgactatcgggcgcgcccgtggacccgcacagttcggacccttccgcggc
tacattacggtgcacccctcatccctgctgaggcagaccgacgagcactcgcgtgcggtc
gcttatgcggccttcgttcgagatttacgtaacgcggcagagcttgccgcacctttttga
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