KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_39918
Entry
HYPDE_39918       CDS       T02646                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt02024  Quorum sensing
hdt03060  Protein export
hdt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HYPDE_39918
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HYPDE_39918
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HYPDE_39918
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hdt02044]
    HYPDE_39918
Enzymes [BR:hdt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HYPDE_39918
Secretion system [BR:hdt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HYPDE_39918
  Eukaryotic Sec-SRP protein
   HYPDE_39918
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_33 DnaB_C nSTAND_NTPase5 ArsA_ATPase AAA_22 AAA_5 AAA_31 ResIII AAA_19 AAA_14 AAA_25 Thymidylate_kin TctA hnRNP_Q_AcD Dynamitin AAA_16
Other DBs
NCBI-ProteinID: AGK59652
UniProt: N0BBL2
LinkDB
Position
complement(3444534..3446114)
AA seq 526 aa
MFQSLSDRLSGVLDKLTRRGALTESDVVEAMREVRRALLEADVALDVVKDFTEKVKTKAV
GAEVLRSVTPGQMVVKIVNDELVAMLGSDAQPIDLHAAPPVGILMVGLQGSGKTTTTAKI
AYRLTNRDRKKVLMASLDTRRPAAQEQLRVLGEQTNVATLPIIAGQTPLQIARRAEDAAK
LGGYDVIIYDTAGRVTVDEELMDEVRDVKAAIHPHETLLVADSLTGQDAVNTAKAFDGRI
GVTGIVLTRADGDGRGGAALSMRAVTGKPIKLIGVGEKWDALEDFHPGRIASRILGMGDV
VSLVEKAAQTIDVEKATKIAEKMKKGSFDLEDLSEQLKQMQKLGGMGGVLGMLPGVAKIK
GQINEAGLDKSLAHQRAIISSMTPKERRNPKVLDAKRKRRIASGSGTKVEDINKLLKMHR
QMADMMKTMGRNGGMLNKFLGRTGGGPSEAELQSMQAELAKLDPKALEQLPADLKEQIAK
GTAGVSGSSLPGLGRGLPGLGGGLPKGLPGLGGGMPKFPGLPGKKR
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgtttcaatcgctctcagatcgcctttccggcgtcctcgacaagctcacccgccgcggc
gctctgaccgagagtgacgtcgtcgaggcgatgcgcgaggttcgccgcgcccttctcgag
gctgatgttgcactcgatgtcgtcaaggacttcaccgagaaggtgaagacgaaagccgtc
ggcgcagaggtgctgcgctccgttacgcccggccagatggtcgtcaagatcgtcaacgac
gaactcgtcgcgatgctcggctccgacgcccagccgatcgacctgcacgcggcgccgccg
gtcggcatcctgatggtcggcctgcaaggctccggtaagacgacgacgaccgccaagatc
gcctatcgcctgacgaatcgcgatcgcaagaaagttttgatggcgtcgctcgacacgcgc
cgacccgccgcacaagaacagctccgcgtgctgggcgagcagacgaacgtcgcaaccctc
cccatcattgccggacagacgccgctgcagatcgcgcgtcgcgccgaagatgcagcaaag
ctcggcggctacgacgtcatcatctacgacaccgccggccgcgtcaccgtcgacgaagag
ctgatggacgaagtccgcgacgtcaaagccgcgatccatccgcatgaaactttgcttgtc
gccgactccctgactggccaggacgccgtcaacacggcgaaagccttcgatggccgcatc
ggcgtcaccggcatcgtgctgacacgcgccgacggcgacggccgtggcggcgccgcactg
tcgatgcgcgccgtcaccggcaaaccgatcaagctcatcggcgtcggcgaaaagtgggac
gcgctcgaagacttccatccgggccgcattgcctcccgaattctcggcatgggcgacgtc
gtctcgctcgtcgagaaggccgcgcagacgatcgacgtcgagaaggcgacgaagatcgcg
gagaagatgaagaaggggtcgttcgacctcgaagatctctccgaacaattgaagcagatg
cagaagctcggcggcatgggcggtgtgctcggcatgttgccgggtgtcgccaagatcaag
ggccagatcaacgaggccggcctcgataaaagcctcgcgcatcagcgcgccattatctcg
tcgatgacgccgaaggagcgccgcaatccgaaggtgctcgacgccaagcgcaaacgccgt
atcgcctcgggttcgggcaccaaggtcgaggacatcaacaagcttctgaagatgcaccgc
cagatggcggatatgatgaagacgatgggccgcaacggcggcatgctgaacaaatttctt
ggccgcacgggcggtggtccgtccgaagccgaactccaatccatgcaagcagaactcgca
aagctcgacccgaaagcactcgaacagcttccggccgatctcaaagagcagatcgccaag
ggcacggccggcgtttccggcagctccttgcccggtctcggtcgaggtctaccgggcctt
ggcggcggtcttccgaaaggtctgccgggtttgggtggtggaatgccgaaattcccgggg
ctccccggaaagaaacgatga

DBGET integrated database retrieval system