Candidatus Hydrogenosomobacter endosymbioticus: HYD_6980
Help
Entry
HYD_6980 CDS
T07863
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec03030
DNA replication
hec03430
Mismatch repair
hec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYD_6980
03430 Mismatch repair
HYD_6980
03440 Homologous recombination
HYD_6980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hec03032
]
HYD_6980
03400 DNA repair and recombination proteins [BR:
hec03400
]
HYD_6980
Enzymes [BR:
hec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYD_6980
DNA replication proteins [BR:
hec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYD_6980
DNA repair and recombination proteins [BR:
hec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYD_6980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_5
AAA_22
RuvB_N
DNA_pol3_delta
AAA_14
AAA_30
AAA_16
TIP49
AAA_19
PIF1
AAA_24
ResIII
Glyco_tranf_2_5
TsaE
nSTAND3
DUF815
AAA_assoc_2
AAA_18
DNA_pol3_delta_C
AAA_2
Rep_fac_C
Mg_chelatase
DEAD
KAP_NTPase
NACHT
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BDB96565
LinkDB
All DBs
Position
complement(797250..798560)
Genome browser
AA seq
436 aa
AA seq
DB search
MDTALFPDNNSDRGRYLVLARKYRPRFFRDIVGQDVFAKIIQNAIRSSRVAHGFLLIGMR
GIGKTTMARLIAKAINCEKLLDIASNTVEEQEIEPCAKCASCLAFEKDRHLDVIEIDAAS
NTGVDDMRQIIESCSYSPVCGKYKVYIIDEVHMLSKSAFNALLKTLEEPPHHVKFILATT
EENKVPNTISSRCLKFHLRRIDVALLEKFIISVCEIEGIKIDSTAAREIAIKSEGSMRDA
LSILEQAILLSSNNYISDQTLYRMFGGVKSDDIMPLVASIFSKNAAEAISIVRKLYSTGA
DPRSILSELMTAIHALSVSLVTGSPELGDYIEQAREFGIANLARIWKLATNGPSELSSSL
PSIALEMMVMRMAYIGHFPSPEAILKQLAGWEAKPPSTPAATPCARAQPDRSYELSGELS
KKASELFGSDAIHAID
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatacagctttatttccagacaacaactctgacagaggtcgttaccttgttttagca
agaaaatataggccaagattttttcgcgatattgtggggcaagatgtgtttgcaaaaatt
atacaaaatgctattcgctcctctagagttgctcatggatttcttctgataggcatgcgc
ggcataggaaagaccactatggctcgcctaatagcaaaagcaataaactgcgaaaaactg
ctagacatagcatcgaatacggtcgaggaacaagaaatagagccttgcgctaaatgtgca
tcttgcttagctttcgaaaaggaccgccacctggacgtgatcgaaattgacgcagcaagc
aacactggcgttgatgatatgcgccagataatagagtcctgctcatacagtcccgtgtgc
ggaaaatacaaggtatacattatcgatgaagtacatatgctttcaaaaagcgcttttaat
gctcttttgaagactctagaagagcccccgcatcatgtgaaatttatattagcaactaca
gaggaaaataaagttccaaacacgatttcttccagatgcctaaaatttcacttacgaaga
atagacgtggcgttgctagagaaattcattatctctgtgtgcgaaattgaaggcataaaa
atagactccactgcagcacgagaaatagcaattaaatctgaagggtctatgcgagatgct
ttgtcaatactggagcaggctattttgctgtcaagtaacaattatatatccgaccaaact
ctttatcggatgtttggtggagtaaaatcagacgacatcatgcctctagtagcttctatt
ttctctaaaaacgcagcagaagccatatctatcgttcggaagctatattcaacaggagca
gaccctaggtccatactaagtgagcttatgaccgcgatacacgccctcagcgtatcgctt
gtaacaggctcaccagaactgggagactacatcgagcaagcgcgagaatttggaatagca
aatctagctcgcatatggaaactcgcgactaacggaccttctgaactatcctcatcgctg
ccatcgatagcgctggaaatgatggttatgagaatggcgtatataggacattttccatct
ccggaagcgatactaaagcagttggccggctgggaagcaaagccgccttcaacgccagct
gccacgccatgcgcgcgcgctcaacctgatcgaagttacgaattgtctggagagctgtct
aaaaaagcctcagagcttttcgggagcgatgctattcacgcgatcgattag
DBGET
integrated database retrieval system
