Herbaspirillum sp. meg3: hmeg3_08050
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Entry
hmeg3_08050 CDS
T05024
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
hmeg3_08050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_08050
Enzymes [BR:
hee01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
hmeg3_08050
DNA repair and recombination proteins [BR:
hee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
hmeg3_08050
Prokaryotic type
hmeg3_08050
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ASU41321
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Position
complement(1778274..1779068)
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AA seq
264 aa
AA seq
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MPATVPSALLDLCASADPSWQAILKTGLQAIADKDPAYLPALVEDTTYLPTDGRLFAAFL
QPIDKVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSDKGLSKQVNRATSLRNFMKMLLV
ADGQVSVDKTSGDALLDIAAKAQADTTGTIQTLSDLQDNLTAQGFLLLNASLVFRTHVAP
VKDAKAWKPFFETVLKGLAEYAETGKKTLPTLVLWGKIAEQLDGLPVVERFPRAVAEHPY
NLTFIAHSGMQKLFGDMHLLKKQA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccggctaccgttccttccgccctgctcgatctttgcgcctctgccgatccttcctgg
caagctatcctgaaaaccggtctgcaagccatcgccgacaaagatccggcctatctgccc
gcattggtggaggacaccacctatctgccgacggacggacgcctcttcgccgccttcctg
cagccgatcgacaaggtgcgttacgtattggtcggtgaaggcccttacccgcgcgcggcc
agcgccaccggcgtgtgcttcatggacggcgcggtcggctcgttgtggtcggacaagggc
ttgtccaaacaagtcaaccgtgccacttcactgcgcaacttcatgaagatgctgctggtc
gccgacggccaggtctccgtcgataaaaccagcggcgacgccctgctcgacatcgccgcc
aaggcgcaggccgacaccaccggcacgatccagacgctgtccgacctgcaagacaacctg
actgcgcaaggcttcctgctgctcaacgccagcctggtgttccgtacgcatgtggcgccg
gtcaaggatgccaaggcctggaagccattctttgaaaccgtattgaaaggattggcggaa
tatgccgaaaccggcaagaagacgctgccgaccttggtcttgtggggcaagatcgcagaa
cagctggatggtttgccggtggtggaacgcttcccgcgcgccgtcgcggagcatccctac
aatctgaccttcattgcccacagcggcatgcaaaaactgttcggcgacatgcacttgctg
aagaagcaggcgtag
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