Helicobacter pylori Gambia94/24: HPGAM_02565
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Entry
HPGAM_02565 CDS
T01917
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
heg
Helicobacter pylori Gambia94/24
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heg03032
]
HPGAM_02565 (gyrB)
03400 DNA repair and recombination proteins [BR:
heg03400
]
HPGAM_02565 (gyrB)
Enzymes [BR:
heg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPGAM_02565 (gyrB)
DNA replication proteins [BR:
heg03032
]
Prokaryotic type
DNA Topoisomerases
HPGAM_02565 (gyrB)
DNA repair and recombination proteins [BR:
heg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPGAM_02565 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADU81355
LinkDB
All DBs
Position
509295..511616
Genome browser
AA seq
773 aa
AA seq
DB search
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNIGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTSEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYKDGLKQFVKDSAKKELLTPIIA
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVFIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYHYTLLELEKRYNLLEVLRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFTTEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILSFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAIFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatataggcgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgatcaatatcact
ttgactagtgaggggtcatgcattgtagaagataacgggcgaggcattcctgtagacatt
catcccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcggggggc
aaatttgataatgatacttataaagtttcaggcggattgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaacgcttgatcatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtattcctattagcgagcttgaaatcattggcaagactaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttacaaaagcgcttcaaagaaatggcgtatcttaacgacggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagaaacttatttctataaagac
ggcttgaaacaattcgtgaaagacagcgctaaaaaagaattgctcacccccattattgcg
tttaaaagcatggatgaagaaacgcgcacttctatagaggtcgctttagcgtatgctgac
gattacaatgaaaacaccttaagctttgtgaataacattaaaacttctgagggcggcacg
catgaggcgggctttaaaatgggcttgtctaaagcgattttgcaatacattgacaataac
attaaaactaaagagtcgcgccccatctctgaagacattaaagagggtttgatcgctgtt
gtgagtttgaaaatgagcgagcctttatttgaagggcagactaaatccaaactcggtagt
tcgtatgcgcgcgcgctggtttcaaaattagtctatgataaaatccatcagtttttagaa
gaaaaccctaacgaagctaaaatcatcgctaataaagccctactagctgcaaaagccaga
gaagccagcaagaaagccagagagcttacaaggaaaaaagacaatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagtgaaatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcctttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaagattcta
aaatcagaagaaattaaaaacatgatcacggcttttgggtgcggcattcaagagagcttt
gatatagaaagattgcgctaccataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccgctgattgaa
caagggcatgtttttatcgctcaagcccctctttacaaatacaagaaaggcaagacagaa
atttatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatctgatgaatttgttaaaagtggcacgccat
taccactacacgcttttggaattagaaaaacgctacaatttgctagaagttttacgcttt
ttgattgagactaaggacgctttaagccttgatatgaaagttttagaaaaaagcatttta
gaaaaattagagggcttgaattatcagatcttacgctcttttactactgaagaaagcttg
catttgcatgcacaaacccctaagggcttggtggaatttaacctagatgacaatctcttt
aaagaagtgttgtttgaagaagcgaattacacctatcaaaagcttatggaatacaatttg
gatttcctagaaaataaggatattttgtcgtttttagaagaagtggaaaaccacgctaaa
aagggagcgaatatccaacgctataaggggctaggcgagatgaaccctaatgatttatgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattgaagatttagaa
aaaaccgatgcgatcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaaacaactagatgtgtaa
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