Herbaspirillum sp. DW155: HBDW_28220
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Entry
HBDW_28220 CDS
T10195
Symbol
cobD
Name
(GenBank) threonine-phosphate decarboxylase CobD
KO
K02225
cobalamin biosynthesis protein CobC
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00860
Porphyrin metabolism
hew01100
Metabolic pathways
hew01240
Biosynthesis of cofactors
Module
hew_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HBDW_28220 (cobD)
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Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BEV16034
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Position
complement(3113457..3114467)
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AA seq
336 aa
AA seq
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MLEHGGNLNDAARHYGRPRTDWLDLSTGINPRPYPAPAPSADAWHRLPETSHALEQAACD
YYRAPRLLAVAGTQAAIQALPQLRLQQDGRPAEVIVAAPIYAEHAHCWRRAGHAVREVPY
DGLDTALREGRCQVLVLCNPNNPTGATVAPETLLRWTAILAARGGWLVVDEAFGDTSHGD
SVAALSDQPGLIVLRSVGKFFGLAGLRLGFVGAAPALLETLADWLGPWSISGPAQQIGTA
ALRDRHWQAATLQTLLSEGQRLHVLLARHGIQASGTPLFQWWPEREAAAFHAAMACEGVW
VRLFTRGAGGIRLGLPPDEAGWSRLQHALNTWSQRG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacacggcggcaatctcaacgacgcggcccgtcattacggccgccctcgcact
gactggctggatctctccacgggcatcaatcctcgtccttacccggcgccggcaccttct
gcggatgcctggcatcgcttgcccgaaacttcgcacgcactggaacaggccgcctgcgac
tactaccgcgccccccgcctgctggcggtggccggcacccaggcggcgatccaggcgctg
ccgcaattgcgcctgcagcaggatggccgcccggccgaggtgatcgtggccgcgcccatc
tacgccgaacatgcgcactgctggcggcgcgccgggcatgccgtgcgcgaggtgccgtat
gacgggctcgatacagccctgcgcgaaggccgctgccaggtgctggtgctgtgcaatccc
aataatccgaccggtgccacggtcgcccccgaaacgctgctgcgctggaccgcgatcctg
gccgcccgggggggctggctggtggtggacgaagcctttggtgacacctcgcatggcgac
agcgtggcggcgctgagcgaccagccgggcctgatcgtgttgcgctcggtcggtaaattc
ttcggcctggcgggcttgcgcctgggcttcgtaggcgctgcaccggcgctgctggagacc
ctggccgactggctgggcccgtggtccatcagcggcccggcccagcagatcggcactgca
gccctgcgcgaccgccactggcaggccgccacgctgcagaccttgctgagcgaaggccaa
cgcctgcatgtgctgctggcgcgacacggcatccaggccagcggcacgccgctgttccag
tggtggccggagcgcgaggctgcggcgtttcatgcagcaatggcgtgcgaaggtgtctgg
gtacgcctcttcacgcgcggtgccggtggcatccgccttggcctgccgccggatgaagcg
ggctggtcgcgcctgcaacacgccctgaacacatggagccaacgtggctga
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