Herbaspirillum frisingense: G5S34_11125
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Entry
G5S34_11125 CDS
T06761
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr02020
Two-component system
hfr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5S34_11125
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G5S34_11125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfr03021
]
G5S34_11125
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hfr02035
]
G5S34_11125
Transcription machinery [BR:
hfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5S34_11125
Bacterial motility proteins [BR:
hfr02035
]
Flagellar system
Flagellar assembly proteins
Stator
G5S34_11125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0154
SLATT_5
UPF0122
MarR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QNB07263
UniProt:
A0A7G6AW79
LinkDB
All DBs
Position
2454564..2455301
Genome browser
AA seq
245 aa
AA seq
DB search
MYNVKGKKGKNDVLEQHAPLVKKLAHQLKAKLPPSVEVDDLIQAGMMGLLDAVNRYEETH
GAQFETYAVQRIRGAMLDELRSSDWLPRSIRQNARKVDEAMQALLQQLGRQPQETEVAQH
LKISLTEYQSLLSECGGHQLIYYEDFHDDDGGHEHFLDRYQTAESDDDPLQNLINGGFRE
AVVDSIKALPEREQILMALYYEQEMNLKEIGAVMGVSESRVCQLHSQAISRMRSYLREHS
WSGVA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgtcaagggaaaaaagggcaagaacgatgtgctggagcagcatgcgccgctg
gtcaagaaactggcgcatcagctcaaggccaaattgccccctagcgtagaggtggacgac
ctgatccaggccggcatgatgggcttgctcgacgccgtcaaccgctacgaagagacccat
ggcgcgcagttcgagacctatgccgtacaacgcattcgcggcgccatgctggacgagctg
cgcagcagcgactggctgccgcgcagcatccgtcagaatgcccgcaaggtggacgaagcc
atgcaggccttgctgcagcagctcggtcgccagccgcaggaaaccgaagtggcgcagcac
ctcaagatcagcctcaccgagtatcagtcgctgctcagtgaatgcggtgggcaccagctg
atctactacgaggatttccacgacgacgatggtggtcatgaacatttcctggatcgctac
cagaccgccgagtccgatgacgacccgttgcagaacctgatcaatggcggcttccgcgaa
gccgtggtggactccatcaaggccctgcccgagcgcgagcagatcctgatggccctctac
tatgagcaggaaatgaacctcaaggagatcggcgctgtcatgggcgtgtccgagtcccgc
gtgtgccagctgcacagccaggcaatctcacgcatgcgctcctatctgcgggagcattcg
tggagtggggtggcctga
DBGET
integrated database retrieval system
