Halorhodospira halophila: Hhal_0833
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Entry
Hhal_0833 CDS
T00462
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hha
Halorhodospira halophila
Pathway
hha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hhal_0833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hha03021
]
Hhal_0833
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_0833
Enzymes [BR:
hha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hhal_0833
Transcription machinery [BR:
hha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Hhal_0833
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Hhal_0833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
ABM61609
UniProt:
A1WV97
LinkDB
All DBs
Position
complement(914449..915447)
Genome browser
AA seq
332 aa
AA seq
DB search
MKGYLKDFLKPRSVEIEPLSDNRAKVVLEPLERGFGHTLGNALRRLLLSSMPGTAVTEVE
IEGVQHEYTAVEGIHEDTVDILLNLKDLAVRLNERDSVTLSVEKQGPGSVTAADIATDHD
VEIQNPDLHIATITHEQPFKASLKIERGRGYLPVTAREEEDTRTIGHLALDASFSPVRRV
SYAVESARVEQRTDLDKLVLDVETNGVVTPEEAVKFAASLLRDQLSVFVDLEGGLLEGGD
EQEEPEIDPVLLRPIDDLELTVRSANCLKAESIHFVGDLVQRTEVELLKTPNLGKKSLNE
IKDTLAEHGLSLGMQLDNWPPPSLGDRARIAG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggtacctgaaggactttctcaagccgcgctcggtcgagatcgagccgctctcg
gacaaccgcgccaaggtggtcctggagccgctggagcggggctttggccacacgctgggc
aacgccctgcggcggctgctgctctcgtccatgcccgggactgcggtcaccgaggtggag
atcgagggcgtacagcacgagtacacggcggtggagggcatccacgaggacactgtggac
atcctcctcaacctcaaggacctcgccgtgcgcctcaacgagcgtgactcggtgacgctc
agcgtcgagaagcaggggccgggttcggtgacggcggcggacatcgccaccgatcacgac
gtggagatccagaatccggatctgcacatcgccacgatcacccacgagcagccgttcaag
gcgtcgctgaagatcgagcgcggccgcggctacctgccggtcaccgcgcgcgaggaggaa
gacacccgcaccatcggtcacctggccctggatgcgagcttcagcccggtccgccgcgtc
tcctacgcggtcgagagcgcccgtgtcgagcagcgcactgacctggacaagctcgtcctg
gacgtcgagaccaacggcgtggtgacgcccgaggaggcggtgaaattcgcggccagcctg
ctgcgtgaccagctgtcggtgttcgtcgacctcgagggtgggctgctggagggcggcgac
gagcaggaagagccggagatcgacccggtgctgctgcgtcccatcgacgacctcgagctc
acggtccgttcggccaactgcctcaaggctgagagcatccacttcgtgggtgatctggtt
cagcgcactgaggtcgagctgctcaagacgccgaacctcggcaagaagtcgctcaacgag
atcaaggacaccctggccgagcacgggctgtcgctgggcatgcaactcgataactggccg
ccgccgtccctcggggaccgcgcccgtatcgccggctaa
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