Halyomorpha halys (brown marmorated stink bug): 106684741
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Entry
106684741 CDS
T07536
Symbol
TBPH
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106684741 (TBPH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106684741 (TBPH)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106684741 (TBPH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
106684741
NCBI-ProteinID:
XP_014282473
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSSYLKVAEDEGEEPIELPSEDDGTLLLSTLAAQFPGTCGLKYRNPESKGIRGVRLVEGR
LHPPDEGWGQNVYYCVFPKENKRKSDDHLENSTAKTKRMETKAKCSDLIILGLPWKTTEQ
QLREYFESFGEVLMAQVKKDPKTGQSKGFGFIRFANHESQVRVMSQRHLIDGRWCDVKVP
NSKEGAQQQVPCKVFVGRCTEDISADDLREYFSKFGEVTDVFIPKPFRAFAFVTFLDPDV
AQALCGEDHIIKQTSVHVSEASPKTDFNNRYNAAMRGQRDQKGYGGGGYGPGGNGAHMYH
PQQHQGNMQGGPAPWAQGGPANRGNLDMPNLQALGITGQGTAGGGAGGQNLTNPLGMGLN
LSALPMNPALVAAALNQAGWGLIGNLQGNQGTGGGDAAPPAPQYPNSGQFGGGQQGTAPP
QPPAAAGGFLNWMNQGGNQTNPETAQNNTGQQQGPWQQRDGGKSQNFMKFLCPEEVLNVE
DNDQWKM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtatttaaaagttgcagaagacgaaggagaggaaccgatagaattaccgtcg
gaagatgacggaactttattgttatcgacgttagccgctcagtttcccggtacttgtgga
ctcaaatatagaaatcccgaatcaaagggcattagaggagtgcggttagtggaaggaaga
ttgcaccctcctgatgaaggatggggtcaaaatgtatattactgtgtatttcccaaagaa
aataaaagaaaatcagatgatcacctagaaaattcgacagccaaaacgaaacgtatggaa
acaaaagcgaaatgttctgaccttattatccttggcctaccttggaaaacaacagaacaa
cagctcagggaatattttgaatccttcggagaagttttgatggcacaggtcaaaaaggat
ccaaaaactggccaatccaaaggattcggttttatcaggtttgcaaatcacgaatcacaa
gtgagagtgatgtctcaaagacatttaattgacggcaggtggtgtgatgtcaaagttcct
aattccaaggaaggtgctcaacaacaggtcccttgtaaggtatttgttggacgatgtaca
gaagatattagtgctgacgatttgcgtgagtatttctccaagtttggggaagtgactgac
gtgttcattccgaaaccattcagagcatttgctttcgtcactttcttggatcctgatgtt
gctcaagcgctgtgcggtgaagatcacatcatcaagcagacgtcagttcacgtatctgag
gcatccccaaagacagactttaataatcgatacaatgcagcgatgcgtggtcagagagat
cagaagggttacgggggaggtggctatggtccaggtgggaatggagcccacatgtatcat
ccgcaacaacatcaaggtaacatgcaaggtggtcctgcaccgtgggctcagggcggcccg
gctaaccgtggtaacttagacatgccgaacctgcaagctcttggtatcactgggcaaggg
acagctggtgggggtgctggggggcagaacttaactaatcctcttggtatggggctcaac
ctctctgccctgccaatgaaccctgctttagttgccgccgcccttaatcaagctgggtgg
gggctgatcgggaatcttcagggtaaccagggcacaggcggaggggatgcagcaccacct
gccccgcagtaccctaactctgggcagtttggtggggggcagcagggtacagctcctccg
caaccccctgcagctgctggcggctttcttaactggatgaaccagggaggaaaccagacc
aacccagaaactgcccagaataacacaggccagcaacaaggtccctggcagcaaagggat
ggtggtaaatcgcagaacttcatgaagtttttatgcccggaggaggtattaaatgttgaa
gacaatgatcagtggaaaatgtaa
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