Halyomorpha halys (brown marmorated stink bug): 106689644
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Entry
106689644 CDS
T07536
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106689644 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106689644 (Not1)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106689644 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106689644 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
TFIIA
Motif
Other DBs
NCBI-GeneID:
106689644
NCBI-ProteinID:
XP_066906422
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MNLDSLTLTLSQISYLVINLTKKNYSATVQEISELVREYGFEADRHYLYKLFSCFEVGLT
SKESPQLQLLSEEIAALLSKPSLESSICFAFDHLIKSKGPRINSLLSQLCKALKLPLIQE
VIFGISLLNSENSDTLNQATQFLRIKLPELIRSYINSDTNSSATEGGLHDTTPEVLHIII
TQVISDSSEQLGVTSETKEAFFRNLCRDFPRDLVPIVLAPLLYSDNSELSMDKLLSDSMN
MSHNMVDPSFDDILGELGISFTSSVEKCRGHLSQLVGRDLKHSDMARILIVMLKSRVEFW
QDTDSKEKSQDPSHVSSPWSVENLVQAARELNPKINWGDVLLELDHTEFLIKDRQGLYLI
ISAIKTGLQNQAFFPDRFPVEHIYRHWKNTEAQVSFLQQILKNPDIFCFSDHPFHQVAVD
ILKAPPETENKEIASWRSLDLIELVLFLAERGHYQEVQEMLKIPVQHCPDVLVLGLLQTI
HPPLATISPFRQEILANLMPTFLGNHPNSAIILHHAWHTQNIAVKQIIMHSMADWYLRGE
SDQSRLTRILDLAQDLKALSLLLNAQSFPFVIDLACLASRRGYLKLEKWLTDKIREHDEP
FITAVLKFLQKRVPHISGLVKEESIPKAAQLPHETLSTILLCLQACVGNVSQEMAEAIHS
VVAACGMIKARTAPPGVLRTHRTLDSFTPSSVFSNQVDSLNSGITGISLATTSSAFTLPA
GLGQLVSNPGSPSRLIAASQSPAFPIMPLGAPGPSLVPQVGIPAAMARLQLTQQQQPIEK
TRIFPKDIEDEANSYFQRIYNHPPHPTISIDEVLDMLKKFMESPKQRERDVFYCMLRNLF
EEYKFFPQYPEKELFITAQLFGGIIERGLVSDYRELGMALRYVLDALRKPHDSKMFYFGI
AALDRFKSRLKEYHKYCEHIASIPHFSQFPQHLIEYIEYGIQSEEPPGRPQGPILPGGIS
AVTTAYKTLTQTTCTTTTTVAVTKASTTSVISSRPSIANATNIDTLLVATEKEEKMTAPP
EALQDKVAFIFNNLSQLNLQTKCDELREIVGDEYHAWMAQYLVMKRASIELNFHALYSNF
LDVLKTNELNKLVLQETFRNIRVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILH
DDLDLKSLLVEAYSKGQQELLYVVPFVAKVLESCSKSRVFKPPNPWTMAIMNVLSELHQE
PDLKLNLKFEIEVLCKNLSLDVAELQPKVYLKDPENLKHLEHQLSPPKIKNEAQAPTPIT
PSQTPTQQQQQSQQQQSQQPQVQPQQQSHPVEDMTPRITNSTPTLAILSPPEPRFNYMQI
NVSSIASIAQHITVNSQLPLLQTHPKLKQFICQAVERAVQEWIHPVVDRAVKIAVTTTEQ
IIKKDFALEPEETRMRQAAHHMVRNLTAGMAMITCRDQLLVSISNNLKNSFLSSLHNPNE
QQKNLVEHAATIIAQENMELACCFIQKTAMEKAVPEMDKHLLPEYDRRKIARNEGRRYCD
SSVLTYQAERMPEQLRLKVGGVTAQQTAVYEELARNIPGFQPISERDAAIFIPKPVPYSA
QDEFDTIFEKLTSELEHYVQTILGSQVLPQVHNILDLLVILRREREDGYAVRLVQKTVEN
LMELSSVTSMDPELVLRHRDLYLRILKTLQDPRAFGTQWTNKHVTMTVLECREEYRYNLE
CIDVLVRSQLINMQQFDVQLAHFMENGQNYVAVTFAMQLVQLYLIDDRNNSVITENDLFN
VVEILVRINAHSRQPPEGLNALIDLLRATHESNIFSDRTHGPAALIISGIHHGKAREYDD
PPGLAEKTEYLLREWVGIYHSPQGAKDPNKAFSLFVHQMNCHGILKTDDLITRFFRLSTQ
MVVELCYRLLPDVTGTSATAVRNKMFHTVDAYVKLISLLVKHSGDANNSQTKINLLNKVL
GIVAGVLQQDHETHQTEFQQLPYQRIFIMLFLELNGTEPILDAINFQILTAYFHTLHILR
PSKSPGFSYAWLELVSHRIFLGKMLGHTPQQKGWVMYAQLLVDLFKYLAPFLRNAELAKP
VTVLYKGTLRVLLVLLHDFPEFLCDYHYGFCDAIPPNCIQMRNLILSAFPRNMRLPDPFT
PNLKVDMLSEISNAPRVLTEFTLMIQPPSFKKELDTYLKARAPVTFLSDLRSNLQVSNEP
GLRYNITLMNALVLYVGTEAIQYIRKKGLTPNMSTIAHSAHMDIFQNLAVDLDTEGRYLF
LNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITF
IELIKNPTYKFWNHEFVHCAPEIEKLFESVARSCMVQKQVQPPVENDLADFLIESYQNLI
WWTICIKSTNKNMTDGRSDVKYVL
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgactttaactttgtcacaaataagttatttggttataaattta
acaaaaaaaaattattctgctactgttcaggagatctctgagctggtacgtgaatacggc
tttgaagcagatcgtcattatctatataaattattctcttgttttgaagttggtttgacg
tccaaagaatcgccacaacttcaacttctctcagaagagatagctgcattattgtcaaaa
ccttctcttgaatcaagtatttgttttgcattcgaccaccttattaagtctaagggccca
cgaataaattccttgttgtctcagttgtgcaaggccctgaaactaccacttattcaagaa
gtcatttttgggatttctcttttgaattcagaaaattcagacacacttaatcaagctacc
caatttttaagaataaaattgcctgaacttattaggtcatacatcaattcagatactaac
agtagtgcaactgaaggtggtcttcacgacaccactccagaggttcttcatattataata
actcaagtaatatctgattcttctgaacaattaggagttacgagtgagaccaaagaagca
ttctttcgaaatttatgtagagactttcctcgagatttggtacccattgtgttagcccct
ttattatattcagacaactcagaattatcaatggataaacttctttctgactccatgaac
atgtctcacaatatggtcgaccctagctttgacgacatcctcggtgaacttggcatttca
tttacaagcagtgtcgaaaaatgtcgaggacatttatcgcagcttgtcggaagagattta
aagcactctgatatggctaggattcttatagtaatgttaaaatccagagtagaattttgg
caagataccgattctaaagaaaagtctcaagatccatcacatgtttcttctccatggagt
gttgagaatctagttcaagctgcaagagaattgaatccaaaaataaattggggtgacgtg
ttactcgaacttgatcacactgaattcctcatcaaagatagacaaggattgtatctgata
atttcagcaatcaaaacaggtttacaaaatcaagcattttttcctgaccgatttccagtt
gaacacatatataggcattggaaaaacacagaagctcaggtttcgtttctgcaacaaata
ttaaaaaatccagatatattttgtttttctgatcatccatttcatcaagtagctgtagat
attttaaaagcacctcctgaaaccgagaataaagaaattgcttcatggcgttcattagat
ttgattgagctagttctttttcttgctgaaagaggtcattatcaagaagttcaagaaatg
ttgaaaataccagtccaacattgtcctgatgttcttgtcttaggattgcttcaaactatt
catcctcctctagctactatttctccatttcgacaagaaattttggctaatctcatgcca
acatttcttggtaatcatcctaattcagccattattttacatcatgcttggcatacccag
aatattgctgtaaaacaaataataatgcattcaatggctgattggtatctgagaggtgag
agtgatcagtctcgactaacgcgtatcctcgatttagcccaggatctgaaagctttatct
ttgcttctcaatgctcagtcttttccatttgtaattgatcttgcctgcctggcttctcgc
cgtggttatttaaaattggaaaaatggctgactgataaaataagagaacatgatgaacca
tttatcactgctgtacttaaatttttgcagaaacgtgttcctcatatcagtggattagtg
aaagaagaaagcatccctaaagctgcacagttacctcatgaaacccttagtacaattctg
ctttgtttacaggcttgtgtagggaatgtttctcaagaaatggctgaagctattcacagt
gttgtagccgcatgtggaatgataaaagctaggactgctccaccaggggtcctgcgaact
catcgaaccctagacagttttactccatcatctgttttttctaaccaagtcgattctcta
aattctggtatcactggaatttctcttgctacaacatcatctgcctttactcttcctgct
ggtttaggtcagcttgtttctaatcctggttcaccatcccgcctcattgctgcctcacaa
tctccagcatttccgatcatgcctcttggagctccggggccttcattagtgcctcaggtt
gggattcctgcagctatggctcgtttacaacttactcaacaacagcagcccatagagaaa
actagaatctttccaaaagacattgaagatgaagctaacagctactttcaaaggatttac
aaccatccaccacatcctacgatatctattgatgaagttctagatatgctaaaaaagttc
atggaatctccaaagcaaagagagcgggatgtattctattgcatgttacgtaaccttttt
gaggagtacaagtttttcccacagtatcctgagaaggaactattcattactgctcagctt
tttgggggtatcatagagcgaggccttgtatctgactatcgagaacttgggatggctttg
agatatgttcttgatgctctcaggaaaccacatgatagtaagatgttttattttggtatt
gctgctttagatcgtttcaaatctagacttaaagaataccataagtattgtgaacatatc
gcgagcattccacacttctcacagttcccgcagcatctgatagaatacattgaatatgga
atacaatctgaagagccaccaggaagaccccagggcccaattttgcctggaggaatatct
gctgtaactacggcttacaaaaccttaacacagactacctgtacaactactactactgtt
gcagttacaaaggcatctactacatcagtaatttcttctagaccttctatagcaaatgcg
actaacattgatacattactagtggctactgaaaaagaagaaaaaatgactgcccctcct
gaagccctacaggacaaagtcgcatttatttttaataatctaagtcagttgaaccttcaa
actaagtgtgatgaattacgagagattgttggtgatgaatatcatgcttggatggcccaa
tatctagtcatgaaacgtgcgagtattgaactgaactttcatgcattatactcaaatttt
ttggatgtactcaaaacaaatgaactcaataaattagttcttcaagaaacatttcgtaat
attagggtactactcaggtctgataaaggaatagcaaatttttctgatagatcactctta
aaaaatcttggccattggcttggtatgctgactcttggtcgtaacaaacctatattgcat
gatgatttagatttgaagtcattactcgttgaagcttacagtaaagggcagcaagaactt
ctttatgttgtaccatttgtggcaaaggttttggaatcatgctctaaaagtcgagttttt
aaacctccgaatccatggactatggctattatgaatgttctttcagaattacatcaagag
cctgatctaaagcttaatcttaaatttgaaatagaagtattatgtaaaaatttatctctg
gatgtagctgaattacaacctaaggtatatttgaaagacccagaaaatttgaaacatctg
gagcatcagctttcacctccaaaaattaaaaatgaagcacaggctcctacacccattacg
ccatcacaaacacctactcagcagcagcagcagtcacagcaacagcagtcacaacaacca
caggttcagccccagcagcagtctcacccagtggaagacatgactcctagaattactaat
agtacaccaactctagctatccttagcccaccggaacctagattcaattatatgcagata
aatgtatcttcaatagcaagtattgctcaacatatcactgtgaattctcagcttcctttg
ttacaaacccatccgaaattgaaacagtttatttgtcaagctgtagagagggctgttcag
gaatggattcatcctgtagttgatcgagctgtcaaaattgctgttactactactgaacag
ataataaagaaggattttgcattagaaccagaagaaacaaggatgcgccaggcagctcat
catatggttcgaaatttaactgcaggtatggctatgataacttgtagagatcaacttcta
gtgtctatcagcaacaacttgaagaacagttttcttagttctttgcacaatcctaatgaa
caacaaaagaatttggttgaacatgctgctacaattattgctcaagaaaacatggaatta
gcatgttgttttatacagaaaacagcaatggaaaaagctgttcccgaaatggataaacat
ttattacctgaatatgataggcgtaaaatagcgcgtaatgaaggtagaaggtactgtgat
tcaagtgtacttacatatcaagctgagcgaatgcctgaacaacttagattgaaggttgga
ggtgtaacagctcagcaaactgctgtatatgaagaattagcaagaaatattcctggtttt
caaccaatatcagaaagagatgctgctattttcattcctaaaccagtgccatattcagct
caggatgaattcgatactatttttgaaaaactcacatctgaattagaacattatgttcag
actattttgggatctcaagttcttcctcaagtacacaatattttggatttacttgttata
ctcagaagagaaagagaagatggttatgctgtccgattagtacaaaagactgttgaaaat
ttaatggagctatcatcagtcacatcaatggatcctgaattggttttaagacatcgtgat
ttgtatctcaggattttaaaaactttacaagaccctcgtgcctttggaacacagtggaca
aataaacatgttacaatgaccgttttggaatgtcgagaagaataccgatacaatttggaa
tgtattgatgtcttagttagatcgcagctaattaatatgcaacaattcgatgtccagtta
gcacatttcatggaaaatggtcagaactatgtagctgtaacttttgcaatgcaattagtt
cagttatatcttattgatgacagaaataattctgtgataactgaaaacgatctgttcaat
gtggtagagatattggtgcgaattaatgctcactcccgccaacctccagaaggattaaac
gcattgattgatttattaagagccactcatgaatcaaacatcttttcggacagaactcat
ggccccgcagctctgataatatccggaatccatcatggaaaggctcgtgaatatgatgac
cctcctggacttgccgagaaaactgagtaccttcttagagaatgggttggaatttatcat
tcccctcagggagctaaggatcccaataaagcattttctttgtttgttcaccagatgaat
tgtcatggaatattaaaaacggatgatttaattacaagattttttcgcttgagtacacag
atggtagtggaactttgttataggcttcttccagatgtgactggaacatctgcaacagca
gttaggaataaaatgttccatactgttgatgcctatgtaaaactgatttccctccttgtc
aaacattctggagatgctaataacagtcaaacaaaaattaatctactaaacaaagttttg
gggatagttgcaggtgtgttacagcaagatcatgaaacacaccaaactgaatttcaacag
ttaccttaccaacgaatatttataatgctatttttagaattaaatggtactgaaccaatt
ttggatgcaataaattttcagatattgacagcatatttccatacacttcacatccttcga
ccgtccaaatctccaggtttttcatatgcgtggttagaattggtttctcaccgcatattt
cttgggaagatgctaggacacactcctcaacagaaggggtgggtaatgtacgcacagctg
ttagtagatttgttcaaatatttggctcctttcttgagaaatgcagaactggccaagccc
gttacagtgctgtataaagggacactcagagttctattggttcttcttcacgattttccg
gagtttctttgtgattaccactacggattctgtgatgctattcctccaaactgcatacag
atgcgaaatctcatactatcggcatttcccagaaacatgaggttgccagatccatttact
ccgaatttgaaagttgatatgctttcggaaatatctaacgccccaagagtattaacagaa
ttcactctgatgattcagcctccttcttttaaaaaagaattagatacatatttgaaagca
agggctcctgtaacattcctctctgatctgagaagcaatctacaggtttcaaatgagccc
ggtcttagatataacatcaccttgatgaatgcccttgttttatatgttggtactgaagca
attcaatatattagaaagaagggtcttactcctaatatgtcgacaattgctcattcagct
cacatggatatatttcagaacttggctgtagatctcgatactgaagggcgttatttattt
ttgaatgccattgcaaatcaactccggtatccaaatagtcatacccattacttcagttgt
acactcttgtatctatttgcggaagcaaacacggaagctattcaagaacaaataacgaga
gttttattggaaagacttattgtaaacaggccacacccatggggtctattgataacgttc
atagaacttataaaaaaccctacttataagttctggaatcatgaatttgtccattgtgct
ccggaaatagagaagctgttcgaatctgttgcacgttcttgtatggttcagaaacaagtt
cagccacctgttgagaacgacttggcagattttttaattgagtcctatcaaaatttaata
tggtggactatttgtattaaaagcacaaataagaatatgacggacggaagaagcgatgtt
aaatatgtactgtaa
DBGET
integrated database retrieval system
