Harpia harpyja (harpy eagle): 128136674
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Entry
128136674 CDS
T10541
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03020
RNA polymerase
hhar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128136674 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
128136674 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhar03021
]
128136674 (POLR2B)
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128136674 (POLR2B)
Enzymes [BR:
hhar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128136674 (POLR2B)
Transcription machinery [BR:
hhar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128136674 (POLR2B)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128136674 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
128136674
NCBI-ProteinID:
XP_052632561
LinkDB
All DBs
Position
2:complement(39211547..39231972)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtacgatgaagacgatgatgaaatcacccccgac
ttgtggcaagaagcctgctggatcgttattagctcctattttgatgaaaagggtttagtc
aggcaacagttggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagag
ccgccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgcccaatgaagccagattgagaaaccttacgtat
tcagcccccttgtatgtggatataactaaaacagttattaaagaaggagaggatcagtta
cagacacagcatcagaaaacttttataggaaaaattcctattatgttacgttcaacatac
tgtttgttgaacggcttaactgaccgtgatctttgtgaactgaatgaatgcccgcttgat
cctggtggctactttatcattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgctg
gccagaggtgggcagggtgcgaagaagagtgctattggtcagcgcattgtagcaactttg
ccatatatcaaacaagaagtccccatcataattgtcttccgtgcactaggctttgtgtcc
gacagggacattttggagcacatcatatatgattttgaagatccagaaatgatggaaatg
gtcaagccttctctggatgaagcatttgtcattcaggagcaaaatgttgctctaaacttc
attggatcaagaggtgcaaagccaggtgtcaccaaagaaaagagaatcaagtatgctaaa
gaagtcttgcagaaagaaatgctcccacatgttggtgtcagtgacttctgtgaaaccaag
aaggcctattttctagggtatatggttcatagattgttgctggcagcactgggaagaaga
gagcttgatgacagagatcattatggcaacaaaagactggatcttgctgggccactgtta
gctttcctattcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaggatttcaacttggaactggcaattaaaacaagaattatt
tcagatggtttgaagtattcattggcgactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgacttttgcatctacgctttcc
catctgagacgcctgaattctccaattggtagagatggtaaactagcaaagcccagacag
ctgcacaatacgctgtggggaatggtctgccctgctgagaccccagagggtcatgcagta
ggacttgtgaagaacttggccctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaggagtggagtatggaaaacctggaagaaatatctccagcagca
atagctgatgctaccaagatctttgttaacggctgctgggtaggcatacacaaagatcca
gagcagctcatgaataccctaaggaagctccgtcgtcagatggacatcattgtgtcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgtcgaccccttttaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaattacagttggcaggatcttgtggccagtggt
gtagtagaatacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacgcactgtgaaattcaccca
tctatgatcctgggagtatgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaggctatgggagtttacattacaaacttc
catgttcgtatggatacactggcacatgtgttgtattatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgatttagagagttaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgctcatacaaagagcaagagtctaaa
aaagggtatgaccaggaagaagtttttgaaaagcctacacgcgaaacttgccaaggcatg
agacatgcaatctatgacaaacttgatgatgatggtttgatagcacctggggtgcgtgtg
tctggggatgatgtcatcattggcaaaacagtaacgctgccagaaaatgaagacgaactg
gaaagcactaacagacgtttcacaaagagagactgtagtacttttctacgaactagtgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaag
attagggtacgctctgtaagaatcccacaaattggagataagtttgccagcagacatggg
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacacctgatataattatcaaccctcatgccatcccttcccgcatgaccattggtcac
ttgatcgagtgtcttcagggaaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcagaagatttccaatcttttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcacag
atcttcattggtcctacatattatcagcgattgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatacttaacaggcagcccatggagggtagatctcgt
gatggtggccttcgttttggagaaatggaacgtgattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccgtaccaagtccatgtctgtaac
ctctgtggaatcatggcaattgcaaacacaaggactcacacctatgaatgccggggatgc
cgtaataaaactcagatatctttggttcgaatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
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