Harpia harpyja (harpy eagle): 128144156
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Entry
128144156 CDS
T10541
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar04510
Focal adhesion
hhar04512
ECM-receptor interaction
hhar04518
Integrin signaling
hhar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128144156 (COL6A2)
04518 Integrin signaling
128144156 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128144156 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128144156 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhar04147
]
128144156 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
hhar00536
]
128144156 (COL6A2)
Exosome [BR:
hhar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128144156 (COL6A2)
Glycosaminoglycan binding proteins [BR:
hhar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128144156 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
128144156 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
128144156
NCBI-ProteinID:
XP_052648526
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All DBs
Position
7:complement(13708323..13739924)
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AA seq
1019 aa
AA seq
DB search
MFRQAFFSTLLCVALVPLHAQFDGDPGDVSPTSCAEKRNCPINVYFIIDTSESVALQTVP
IQSLVDQIKQFIPMFINKLESELYQSQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLTRL
SAINYLGRGTFTDCAISNMTEQIQTQMASGVNFAIVITDGHVTGSPCGGMKVQAERARDM
GIKLFAVAPSENVYEQGLREIANLPHELYRNNYAITQKDTLEIDENTIDRIIQAMKHEAY
GECYRMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GERGDEGVKGDPGRPGRSGPPGPPGEKGSPGLPGNPGPQGPPGSKGRRGEAGPPGPKGEP
GRRGDPGTKGSKGTPGAKGERGDPGPEGPRGLPGEVGSKGARGDQGLPGPRGPSGAVGEP
GKIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGIRGELG
PKGVQGTKGAKGEPGDPGPGGEPGLRGPTGEAGPEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGVV
QYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREKA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQIVCPELPCQTELAVAQCTQRPIDVVFLLDGSER
IGEQNFHRAHHFVEEVARQLTLARSNSDNMNARIALLQYGSERDQDVVFPLTYNLTEISS
ALAQIKYLDSSSNIGSAIIHAINNIVLSPGDGQRLARRNAELSFVFITDGITGSKNLEEA
INSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttccgacaagcctttttttccactctcctttgtgtggctctagttcctctccatgct
cagtttgatggggatcctggagatgtcagtcctacctcctgtgcagaaaagaggaactgc
cccatcaatgtgtacttcatcattgacacttcagagagtgtcgctctgcagactgtgcct
atccagagcctcgtggatcaaataaagcagttcattcctatgttcatcaataaactggag
agtgagctctaccagagccaagtctacatcacttggcagtttggtggacttcattactca
gatgtggtggaaatttacagccctttaactagcagcaaagacatatacctcacccggctg
tctgctattaactaccttggccggggcaccttcacggactgcgctatctccaacatgacg
gagcagatccagacccagatggcctccggtgtgaactttgcaatagtcatcactgatggc
catgtcactggcagcccctgcggggggatgaaggtgcaggctgagagggcacgagacatg
gggatcaagctctttgcagtggcccccagcgagaacgtctacgagcagggactgcgagag
attgccaacctgccacacgagctgtaccgcaacaactatgccatcacgcagaaagacacc
ctggaaatcgatgagaacaccatcgacaggataatccaagctatgaaacacgaagcctac
ggagagtgctacaggatgagctgcctggagattgcaggtccgcctggtcccaagggatac
cgagggcagaagggtgcaaaggggaacatgggtgagccaggctcccctgggctgaaggga
cgacagggtgacccgggtattgaaggtccaatcggataccctggtcccaagggtgtccca
ggactgaaaggagagaagggtgagattggatctgatggacggaggggtgctgctggtttg
gcaggcaggaacggcactgatggacagaagggcaagctggggagaattggaccaccaggc
tgcaagggagaccccggtgacaagggccctgatggctatccaggagatgcaggagaccaa
ggtgaaagaggagatgaaggcgtaaagggagatcctggccggcctggtcgcagcggaccc
ccaggacctccaggagaaaaaggaagcccgggacttccaggcaaccctggacctcaaggg
cctcctggaagtaagggaagaagaggtgaagcaggacctcctggacccaaaggagagcct
ggtcgacgtggagatccagggacaaaaggcagcaaaggcactcctggcgccaaaggagaa
aggggagatcctggtccagagggtcctcgtggcctgcccggtgaggttggaagcaaagga
gcgaggggagaccaaggactgccaggacctcgaggcccttcaggtgctgtgggagagcca
ggcaagataggatcacgtggggaccctggtgacttgggcccaagaggtgatgccggacca
ccaggaccaaagggtgacagaggcagacctggctttagctaccctggacccagaggacca
cagggtgacaagggtgagaaggggcagccaggacccaagggaataagaggtgagcttgga
ccaaaaggagtgcaagggaccaaaggagcaaagggagaaccgggtgaccctggcccggga
ggggaacctggactccgcggtccaactggggaagcaggccccgaggggacccctggccca
ccaggagatcctggcctcactgactgcgacgtgatgacctacgtgcgagagacgtgcgga
tgctgtgactgtgagaagcgctgtggtgccctggacatcatgttcgtcatagacagctca
gagagtattggctacaccaacttcaccctggagaaaaattttgtggtcaatgtggtcagc
cggctggggtctattgccaaggaccccaagtcgcagacaggtgcccgtgttggggtggtg
cagtacagtcacgaggggaccttcgaagccatcaagcttgatgatgagcgcattgattca
ctgtcaagcttcaaggaagcagtgaagcgcctggagtggattgctggaggcacctggacg
ccatctgcccttcagtttgcctacaacaagctcatcaaggaaagcaggcgagagaaagcc
caggtgtttgctgtggtgatcacagatgggcgctacgacccccgggatgatgacaagaac
ctaggggctctttgcggtagagatgtggtcgtcaacaccattggcattggagacatgttt
gatcagccagaacagagcgagaccctggtctccattgcctgcaatgaaccccagcgagtc
cagaagatgaggctcttctcagacctggtggcggaggaattcattgacaagatggaagac
gtgctctgcccagatccacagatcgtctgccctgagctgccctgtcagacagagctcgca
gtggcccagtgcacgcagcgccccattgacgttgtcttcttgctcgatggctctgaaagg
atcggggagcagaacttccacagggcccatcactttgtggaggaggtggcccgacagctc
acgctagccaggagcaacagcgacaacatgaatgcccggattgcgttgctgcagtacggc
agtgagagggaccaggatgtggtcttcccactgacctacaacctgacagaaatctccagc
gccctggcgcagatcaagtacctggactcatcctccaacattgggtcagccatcatacac
gccatcaacaacatcgtgctcagcccaggagatgggcagcgacttgcccggcgcaatgct
gagctctcctttgtcttcatcactgacggtatcacaggaagcaagaacctcgaggaggcc
atcaactccatgaagaagcaagatgtcatgcccacggtagtggctcttgggagtgacgta
gacatggacgtcctgctgaagcttggcctcggggaccgggcagccatattccgggagaag
gactatgacagcctctcccagcccagcttctttgacaggttcattaggtggatatgttaa
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