Halobacterium hubeiense: Hhub_3418
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Entry
Hhub_3418 CDS
T04202
Symbol
arf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Hhub_3418 (arf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhb03019
]
Hhub_3418 (arf1)
03012 Translation factors [BR:
hhb03012
]
Hhub_3418 (arf1)
Messenger RNA biogenesis [BR:
hhb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Hhub_3418 (arf1)
Translation factors [BR:
hhb03012
]
Eukaryotic type
Release factors
Hhub_3418 (arf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
RbpA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CQH61299
UniProt:
A0A0U5H681
LinkDB
All DBs
Position
I:2187188..2188438
Genome browser
AA seq
416 aa
AA seq
DB search
MSEQEGAPSEDRRKYEFQKVIEDLKDYTGSGTQLVTIYIPPDKQISDVVAHVTQEHSEAS
NIKSKQTRTNVQDALKSIKDRLRYYDTFPPENGLVVFSGAVDSGGGRTDMVTEVLESPPQ
PIESFRYHCDDEFLTEPLEEMLGDKGLYGLIVLDRREANVGWLKGKRIEAVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVPKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDSVLGKFDVSYTDESGLKELVDRAQDTLAEADLMDDKSDMEEFFKELNGGNL
ATYGFEPTRKNLVMGSVETLLISEDLRKDIVTYECPNGHEERELVGQRADTPDHTCSECG
EDAEAAERDDAIDHLMEIADQRGTDTHFISTDFEKGEQLLTAFGGIAGLLRYGTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggagggcgcaccgtccgaggaccgccgaaagtacgagttccagaaggtc
atcgaggacctcaaggactacaccgggagcggcacccagctggtgaccatctacatcccc
ccggacaagcagatttcggacgtcgtcgcccacgtcacgcaggaacactccgaagcctcc
aacatcaagtccaagcagacccggacgaacgtccaggacgcgctgaagtccatcaaggac
cgactgcggtactacgacacgttcccgccggagaacggcctcgtcgtcttctccggcgcc
gtcgactccggcggcggccgcacggacatggtgacggaggttctggagtcgccgccccag
cccatcgagtcgttccgctaccactgcgacgacgagttcctcaccgagcccctcgaggag
atgctcggagacaagggcctctacggcctcatcgtcctcgaccgccgcgaggccaacgtc
ggctggctgaagggcaaacgcatcgaggccgtcaagtccgcgtccagcctcgtccccggc
aaacagcgcaagggcggccagtccgcacagcggttcgcccgcctccggctggaagccatc
gacaacttctaccaggaggtcgccgggatggccgacgacctcttcgtcccgaagcgccac
gaactcgacggcatcctcgtcggcggcccctccccgaccaaggacgagttcctcgacggc
gactacctccaccacgagcttcaggactccgtgctcgggaagttcgacgtctcctacacc
gacgagtccggcctgaaggaactggtcgaccgcgcgcaggacacgctcgcggaagccgac
ctgatggacgacaagtccgacatggaggagttcttcaaggagctcaacggcggcaacctc
gccacctacggcttcgaacccacccggaagaacctcgtcatgggctcggtggagacactg
ctcatctccgaggacctccgcaaggacatcgtcacctacgagtgcccgaacggccacgaa
gaacgcgaactcgtcggccagcgcgccgacacccccgaccacacgtgctcggagtgcggc
gaggacgcggaagccgccgaacgcgacgacgccatcgaccacctcatggaaatcgccgac
cagcgcggcaccgacacccacttcatctccaccgacttcgagaaaggcgaacaactgctc
accgccttcggcgggattgccgggctgctgcggtacggcacgggcgtctaa
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