Halobacillus halophilus: HBHAL_1122
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Entry
HBHAL_1122 CDS
T02031
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HBHAL_1122 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhd03021
]
HBHAL_1122 (rpoB)
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_1122 (rpoB)
Enzymes [BR:
hhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HBHAL_1122 (rpoB)
Transcription machinery [BR:
hhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HBHAL_1122 (rpoB)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HBHAL_1122 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
CCG43503
UniProt:
I0JH85
LinkDB
All DBs
Position
131299..134826
Genome browser
AA seq
1175 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTASYQWFLEEGLKEMFKDISPIEDFTG
NLSLEFVDYSLGEPKYPVDESKDRDVTYNAPLRVKVRLLNNETGEVKEQEVFMGDFPLMT
DTGTFIINGAERVIVSQLVRSPSVYYNKKIDKNGKRGYTATVIPNRGAWLEFETDAKDVA
HVRIDRTRKLPITVLLRALGFGTDQEIIDLIGENEYLKNTLEKDNTENSEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLARVGRYKMNKKLHIKDRLFNQTLAETLVDEETG
EVLAEKGDKIDRRLLNKLIPHFDNEETTLSERSLDPAEGVLEEPMRVQSVKIVDPTDPEG
ERSINVIGNANIDRDVKNITPADIISSISYFFNLLHNVGGTDDIDHLGNRRLRSVGELLQ
NQFRIGLSRMERVVRERMSIQDTSSITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPL
AELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKV
NEFGFIETPYRRVDPDTNKVTSQFDYLTADEEDNYVVAQANAKLEEDGSFTDPEVIARFR
GENTVVGRDRLDYMDVSPKQVVSAATACIPFLENDDSNRSLMGANMQRQAVPLLQPDAPL
VGTGMEYVSGKDSGAAVICRNEGIVERVEAKEVFIRRISEVDGKEVEGDLDRYRLQKFIR
SNQGSCYNQRPIVSKGDRVTKGEILADGPSMDMGELALGQNPLVAFMTWDGYNYEDAIIM
SERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRDLDERGIIRVGAEVS
DGDLLVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNRED
GDELPPGVNQLIRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPFLPDGTPVDVML
NPLGVPSRMNIGQVLELHLGMAARLLGERVATPVFDGAREEDVWETLQEAGMSRDAKTIL
YDGRTGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQS
LGMDVKILSGDEQEIEMRDIEEEQTKESENLNLDD
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagttatgctcgtatc
agtgaagttttagagttacctaacttaattgaaattcagacggcttcctaccaatggttc
ctggaagaaggtttgaaagaaatgttcaaggacatttctccaattgaagatttcacaggt
aacttatcattagagtttgtagactacagccttggcgaaccaaagtatccagtggatgag
tcaaaagatcgcgatgtaacatataatgcaccgcttcgtgtgaaagttcgtctcttaaac
aatgagacaggagaagtgaaagagcaagaagtgtttatgggagatttccctctcatgaca
gacaccggtacctttatcattaatggtgctgagcgcgttatcgtttcgcagcttgttcgt
tctccgagtgtatattacaacaaaaagattgataaaaacggtaagagaggttacacggct
actgttattccaaaccgtggtgcgtggcttgagttcgaaaccgatgcgaaggatgtagca
catgtccgtatcgatcgtactcgtaaattaccaatcaccgtactgctacgtgctttagga
ttcggaacagaccaggagattattgatcttattggtgagaacgaatacttgaagaacacg
cttgagaaagataatacagagaacagtgagaaagcattgcttgaaatctatgagcgtctg
cgccctggcgagccgccaacagtagaaaatgctaagagtttacttgtttctcgtttcttt
gatccgaagcgctatgatctagctcgcgtcggacgttataaaatgaataaaaagcttcat
ataaaagatcgattgtttaatcaaacgcttgctgaaacgttagtagacgaagaaacaggc
gaagtactggcagaaaaaggcgataaaattgatcgtcgtctgctcaataaattgattcca
catttcgataatgaagaaactacccttagtgaaagatctcttgatccagctgagggagta
cttgaagaaccgatgcgtgtacaatcggtgaaaattgtagacccgacagatccagaagga
gaacgttccattaatgtgatcgggaatgcaaacatcgaccgtgatgtaaaaaatattaca
ccggcagatatcatttcttctatcagttatttctttaacttgctgcataatgtgggtgga
acagatgacattgaccacttaggtaaccgtcgtcttcgttccgtaggtgaacttttgcag
aaccagttccgtattggtctatcccgtatggagcgcgtagtacgtgaacgtatgtcgatc
caggacacttcatctattactccgcagcagttaattaatatacgtccagtgattgcttca
attaaagagttctttggcagctctcagttatctcagttcatggaccagactaacccgcta
gcggaattaacacacaaacgtcgtctttctgctctaggaccaggtggtttaacacgtgag
cgtgcaggatttgaagtccgtgacgtacactactcccactacggacgtatgtgtccaatc
gaaactcctgagggaccaaacatcggtctgatcaactccttatcttcttatgcgaaggta
aatgaatttgggtttatcgaaacaccttatcgtcgagtggatccagatacaaacaaagta
acttctcaatttgattatctgacagccgatgaggaagataattacgttgttgcccaggcc
aacgctaaactcgaagaagacggttccttcacggatcctgaagttatcgctcgtttccgt
ggtgaaaacacggtagtaggccgtgatcgcttagattatatggacgtatcaccgaagcag
gtagtatctgcggcaaccgcttgtattccattcttggaaaacgatgactctaaccgttct
ctaatgggtgcaaatatgcagcgtcaggctgtaccattgcttcagccggatgctccactt
gtaggtactggaatggaatatgtatcaggtaaagactcaggtgcagctgttatctgccgc
aatgaaggtatcgttgagcgtgtagaagcaaaagaagtgttcatacgccgcatatctgaa
gtagatggcaaagaagtagaaggcgatcttgatcgttaccgtcttcagaaattcatccgt
tccaaccagggaagctgttataaccagcgtccgattgtttccaaaggcgatcgtgtaacg
aaaggggaaatccttgctgatggaccttccatggatatgggagagttagcacttggacaa
aacccactggttgcattcatgacatgggatggttacaactatgaggacgccatcatcatg
agtgagcgtctggtaaaagatgacgtgtacacttctattcatattgaagaatatgaatca
gaagcccgcgatacgaaacttgggccagaagagattacaagagacattcctaacgtaggt
gaagatgctcttcgtgacttggatgaacgtggaattatccgtgtaggagctgaggttagc
gatggagaccttcttgtaggtaaagttactcctaaaggggttacggaattatctgctgaa
gaacgtctgctccatgctatctttggtgaaaaagcccgtgaagtccgcgacacttctctt
cgtgtacctcacggtgcaggcggaattgtgcttgatgttaaaatcttcaatcgtgaagac
ggagatgaacttccgccaggagtcaaccagctgattcgcgtgtacatcgttcagaagcgt
aagatatctgaaggtgacaaaatggctggtcgtcacggaaacaaaggtgttatctctaag
attcttccagaagaagatatgccattcttaccagatggaactccagtagatgtcatgtta
aacccgcttggtgtaccatctcgtatgaatattggacaagtacttgagcttcacttaggt
atggctgcccgtctccttggagaaagagtagcaactccggtatttgatggtgcccgagaa
gaggatgtttgggagacgcttcaggaagctggtatgtcccgtgatgcgaagaccattctg
tatgatggacgcacaggggaaccgtttgataaccgtgtatctgttggtgttatgtatatg
attaaactggcacacatggttgacgacaagctgcacgcccgttccactggaccttactct
cttgtaacccagcagccattgggcggtaaagctcaatttggtggtcagcgtttcggtgag
atggaggtatgggcactagaagcatatggtgccgcctatactcttcaagaaattctgaca
gtcaagtcagatgacgtagtcggtcgtgtgaaaacgtatgaagcgattgttaaaggtgat
aacgttccagaaccaggcgtacctgaatcctttaaagttctaattaaagagcttcaaagt
ttaggtatggatgtgaaaattctttctggtgatgaacaagaaatagaaatgcgggatatc
gaagaagagcaaacgaaagaatccgagaatttaaacctagacgattaa
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