Herbaspirillum huttiense: E2K99_00735
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Entry
E2K99_00735 CDS
T05937
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E2K99_00735 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhf03021
]
E2K99_00735 (rpoB)
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_00735 (rpoB)
Enzymes [BR:
hhf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E2K99_00735 (rpoB)
Transcription machinery [BR:
hhf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E2K99_00735 (rpoB)
DNA repair and recombination proteins [BR:
hhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E2K99_00735 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DNAPolymera_Pol
TOBE
Motif
Other DBs
NCBI-ProteinID:
QBP73624
UniProt:
A0A4P7A3H9
LinkDB
All DBs
Position
154833..158939
Genome browser
AA seq
1368 aa
AA seq
DB search
MHYSFTEKKRIRKSFAKRANVHNVPFLLATQIESYQNFLQPERAASERKNEGLQSAFTSI
FPIVSHNGFARLEFLSYVLGAPPFDVKECQQRGLTFASPLRAKVRLVILDKESPTKPVVK
EMKEQEVYMGELPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGMTSEQILANFFVFDNFNLHAE
GADMEFVSERLRGEVARFDITDKSGKVMVAKDKRINAKHVRDIEAAGIKHISVPEDYLLG
RVLAKNIVDPETGEVVASANDELTEELLAKLREANISAIQTLYTNDLDQGGYISQTLRTD
DTADQTAARVAIYRMMRPGEPPTEESVEALFNGLFYSEDRYDLSAVGRMKFNRRVSRDEL
TGPMTLSNDDILAVIKILVELRNGRGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAEADNLMPHDLINSKPISAAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKV
EGSKVTNQIDYLSAIEEGRYVIAQANATIDGEGKLSDELVSAREAGETILVSPERVQYMD
VAPGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPLVGTGIERTVAVDSGT
TVQALRGGVVDYVDAGRVVIRVNDEEAQAGEVGVDIYNLIKYTRSNQNTNINQRPIVKIG
DRVAKHDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELSVVARDTKLGAEEITRDISNLAENQLARLDESGIVYIGAEVEAGDTLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLERLLIGKVANGGPKKLVKGTKLDKAYLDDLDKFHWFDIR
PADDDIANALEAIKESIAEKRHQFDLAFEEKRKKLTQGDELPPGVQKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSRILPIEDMPHMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGLRLGEMVQAQAKVAELRKFLTTIYNESGKKEELDTFSDEEIIELVTNLKKGVPFAT
PVFDGAHEEETRRMLDLAYPDPIAKQLGMTPSKNQVTMYDGRTGEAFERTVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLERE
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcactactcatttactgagaagaagcgcattcgcaaatccttcgcgaaacgcgcaaac
gtccacaacgttccgttcctgctcgcgactcagatcgagtcgtatcagaatttcctgcaa
cccgaacgtgccgcatcggaacgcaagaatgaaggcctgcaatcggctttcacctcgatt
ttccccatcgtgtcgcacaatggctttgcgcgcctcgaattcctgtcgtatgtgctgggc
gctccgccgtttgacgtcaaagagtgccaacaacgtggcctgaccttcgcgtccccgctg
cgtgccaaggtgcgtctggtgattctggacaaggaatcgcccaccaagccggtcgtcaag
gaaatgaaggaacaggaagtctacatgggcgaactgcccctgatgaccaccaccggttcc
ttcgtcatcaacggcaccgagcgcgtgatcgtgtcccagctgcaccgctccccgggcgtg
ttcttcgaacacgaccgcggcaagacgcactcgtcgggcaagctgctgttctcggcccgc
atcattccttaccgtggctcctggctggacttcgaattcgacccgaaggacatcctgttc
ttccgcgtcgaccgccgccgcaagatgccggtgacgatcctgctcaaggccatcgggatg
acctccgagcagatcctcgcgaacttcttcgtcttcgacaacttcaacctgcacgccgaa
ggcgcggacatggagttcgtctccgagcgcctgcgcggtgaagtcgcacgtttcgacatc
accgacaagtcgggcaaggtgatggtcgccaaggacaagcgcatcaacgccaagcacgtg
cgtgacatcgaagccgccggcatcaagcacatctccgtgcctgaggactacctgctgggc
cgcgtgctggccaagaacatcgtcgatccggagaccggtgaagtcgtggccagcgccaac
gacgagctgaccgaagaactgctggccaagctgcgcgaagccaacatctcggccatccag
accctgtacaccaacgacctggaccagggcggctacatctcgcagaccctgcgcaccgac
gacaccgctgaccagaccgctgcacgcgtggcgatctaccgcatgatgcgtcctggcgaa
ccgccgaccgaagagtccgtggaagccctgttcaacggcctgttctacagcgaagaccgt
tacgacctgtcggccgtgggccgcatgaagttcaaccgtcgcgtcagccgcgacgagctg
accggtccgatgaccctgtccaatgacgacatcctggccgtcatcaagatcctggtcgaa
ctgcgtaacggccgtggcgaagtcgatgacatcgaccacctgggcaaccgccgtgtgcgt
tgcgtgggtgaattggccgaaaaccagttccgcgccggcctggtgcgcgtggagcgcgcc
gtcaaggagcgcctgggccaagccgaggcggacaacctgatgccgcacgacctgatcaac
tccaagccgatctcggctgccatccgtgagttcttcggttcgtcccagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgcgtttccgccctgggc
cctggcggtctgacccgcgaacgtgccggcttcgaagtgcgcgacgtgcacccgacccac
tacggccgcgtctgcccgatcgaaacgcctgaaggcccgaacatcggcctgatcaactcg
ctggcgctgtatgcccgcctgaacgaatacggtttcctggaaaccccgtaccgcaaggtc
gagggcagcaaggtcaccaaccagatcgactacctgtcggccatcgaagaaggtcgttac
gtgatcgcccaagcgaacgcgaccatcgacggcgaaggcaagctgtccgacgaactggtg
tcggcccgtgaagctggcgaaaccatcctggtctcgccggaacgcgtgcagtacatggac
gtggccccgggccaggtggtgtcggtggcagcttcgctgattccgttcctggaacacgat
gacgcgaaccgtgcactgatgggcgccaacatgcagcgccaggccgtgccttgcctgcgt
ccggaaaagccgctggtcggcaccggcatcgagcgtaccgtggcagtcgactcgggtact
accgtgcaagccctgcgtggcggcgtggtggactacgtcgatgcaggccgtgtggtgatc
cgcgtcaacgacgaagaagcgcaagctggcgaagtcggtgtggacatctacaacctgatc
aagtacacccgttccaaccagaacaccaacatcaaccagcgcccgatcgtcaagatcggt
gaccgcgtggccaagcatgacgtgatcgccgacggtgcctccaccgacatgggcgagctg
gccctgggccagaacatgctggtggcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgaaaaggtcgtggccgatgaccgctacacatcgatccacatcgag
gaactgtcggtggtcgcacgtgacaccaagctgggtgcagaagaaatcacccgcgacatc
tccaacctggccgagaaccaactggcccgtctggatgagtcgggtatcgtctacatcggc
gccgaagtcgaagctggcgacaccctggtcggcaaggtcaccccgaagggcgagacccag
ctgaccccggaagagaagctgctgcgcgcgatcttcggcgagaaggcttccgacgtgaag
gacacctcgctgcgcgtgccctcgggcatggtcggcaccgtcatcgacgtgcaagtgttc
acccgcgaaggcatccagcgtgacaagcgcgcccagcagatcatcgatgatgaactcaag
cgctaccgcctggacctgaacgaccagctgcgtatcgtggaaggcgatgccttccagcgt
ctggagcgtctgctgatcggcaaggtcgccaacggcggtccgaagaagctggtcaagggc
accaagctggacaaggcttacctggacgacctggacaagttccactggttcgacatccgc
ccggccgatgacgacatcgccaacgcgctggaagccatcaaggaatccatcgccgagaag
cgtcaccagttcgacctggccttcgaagagaagcgcaagaagctgacccagggcgacgaa
ctgcctcctggcgtgcagaagatggtcaaggtctacctggccgtgaagcgtcgcctgcag
cctggcgacaagatggccggccgtcacggcaacaagggtgtggtctcgcgtatcctgccg
atcgaagacatgccgcacatggccgacggtacccccgccgacatcgtgctgaacccgctg
ggtgttccgtcccgtatgaacgtcggccaggtgctggaagttcacctgggctgggcggcc
aagggtctgggcctgcgtctgggcgagatggtgcaggcgcaagccaaggtcgcggaactg
cgcaagttcctgaccaccatctacaacgaatcgggcaagaaggaagaactggataccttc
agcgatgaggaaatcatcgagctggtgaccaacctgaagaagggcgtgcccttcgcgacc
ccggtgttcgacggtgcgcatgaggaagaaacccgccgcatgctcgatctggcctatccg
gacccgatcgccaagcagctgggcatgaccccgtccaagaaccaggtcaccatgtatgac
ggccgtaccggcgaagctttcgagcgcaccgtgaccgttggctacatgcactacctgaag
ctgcaccacctggtcgacgacaagatgcacgctcgttccaccggcccgtactcgctggtg
acccagcagccgctgggcggcaaggcgcagttcggcggccagcgtttcggcgaaatggaa
gtgtgggcactggaagcttacggtgcctcctacgtcctgcaggaaatgctgacggtgaag
tccgacgacgtgaacggccgtaccaaggtgtacgagaacctggtcaagggcgatcacgtg
atcgatgccggcatgccggaatccttcaacgtgctggtcaaggaaatccgctccttgggt
atcgacatcgacctggaacgcgaatga
DBGET
integrated database retrieval system
