Halomonas hydrothermalis: CLM76_16660
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Entry
CLM76_16660 CDS
T05117
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03030
DNA replication
hhh03430
Mismatch repair
hhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM76_16660 (holB)
03430 Mismatch repair
CLM76_16660 (holB)
03440 Homologous recombination
CLM76_16660 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhh03032
]
CLM76_16660 (holB)
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_16660 (holB)
Enzymes [BR:
hhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM76_16660 (holB)
DNA replication proteins [BR:
hhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM76_16660 (holB)
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM76_16660 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ATH79127
LinkDB
All DBs
Position
complement(3559717..3560700)
Genome browser
AA seq
327 aa
AA seq
DB search
MVVNDVLPWHQSTWRQLVRLSDSGRMPHALLLSGAHGVGKQQLAEALIARTLCAQPGDQA
CGHCHACHMLASGYHPDLLRVSPEEGKRQIRIDPIREVNRFVSQTAQQGGYRVIVVSPAE
AMNIAAANALLKSLEEPGEKTLFILLSDVPSRTLPTIRSRCQQWALPSVAFDECRGWLTQ
QLGGDEAHFWWQVSGGLPLLAVELAAPEERALRHQIHDCFEQLVRGAEPVAEAARLDRQA
IDSILWYGIAWLEDLIRLGLSGEQSALHNPDLAPLYRQAVKNGRVQDWFRLLDYAREQRR
LLAVGANPNPQLVLEAWLVRWSALLRS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgaatgatgtcttgccgtggcaccagtcgacgtggcggcagctggtgcgcctg
tccgacagcggtcgcatgccccatgcgctgctgctcagcggcgcccatggggtgggcaag
cagcagcttgccgaagcgctgatcgcacgcacgctgtgcgcgcagcccggtgaccaggcg
tgtggtcattgccatgcctgccatatgctggcgtcaggctatcaccccgacctgctgagg
gtgtcgccggaggagggcaagcgtcaaattcgcatagaccccattcgcgaggtcaaccgt
ttcgtgtcacaaacggcgcagcagggcggctaccgagtcatcgtcgtgtcaccggcggag
gccatgaacatcgcggcggccaatgcgctgctcaagagcctcgaggagccaggtgaaaag
acgctgttcattctgctctccgatgtaccctctcgcacgctgcccaccatccgttcgcgc
tgccagcagtgggcgctacccagcgtggcattcgacgagtgccgtggctggctgacccag
cagttgggtggtgacgaggcacacttctggtggcaagtttcaggcggactgcccttgctg
gcggtggagctggcggcgccggaggagcgggcgctacgccatcagattcatgactgcttc
gagcagctggtcaggggtgccgaaccggtggcggaggcggcgaggttggatcgtcaggcg
atcgattcgatcttgtggtacggtatcgcctggcttgaagacttgatccggctggggctg
tcgggcgagcaaagcgcgttgcacaatcccgatcttgcgccattgtatcgacaagccgtc
aagaatggccgggttcaggactggtttcgactgctcgattacgcccgcgagcaacgtcgg
ctactggccgtgggagccaaccccaatccgcaactggtgctggaggcctggctggtacgt
tggtcggccctgctgcgctcatga
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