Hippoglossus hippoglossus (Atlantic halibut): 117761000
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Entry
117761000 CDS
T07778
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117761000 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117761000 (slc6a11b)
Transporters [BR:
hhip02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117761000 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117761000
NCBI-ProteinID:
XP_034440417
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Position
5:10700582..10723922
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AA seq
611 aa
AA seq
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MTAEKSGPVVNGKPEDGRDPEGSSSSLDRGDYNERGHWNNKIEFFLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKICPLFEGIGYA
TQVIEAYLNAYYIVILAWAIFYFFNCFTTELPWAGCGHYWNTENCVDYYGENATNITNLN
ATSPVIEFWERRVLKISDGIEHMGGVRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYVMLLVLLIRGVTLPGALEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAFEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWAGLFFIMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREW
LILGMSIVSFFIGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYT
NIEDMIGYKPVFFIKWCWMILTPGICSAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWAMA
MSSMVCIPLGMIWMIWKTPGTFSERIKKLTTPSKDLKMRGKLAALSPYAANDAKLKVDGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaaaagtgggccggttgtaaacggtaaaccagaggatggtagagatccg
gaagggtccagctccagcctcgaccggggggactacaatgagaggggccattggaacaac
aagatcgagtttttcctgtctgtggccggagagatcatcgggctgggcaatgtgtggagg
ttcccttacctctgctacaagaatggaggaggtgcgttcttcgttccgtatgtcatcttc
tttgtgtgctgcggtatccccgtgtttttcctggagacggccctgggtcagttcaccagc
gagggaggcatcacctgctggaggaaaatctgcccgctgtttgagggtatcggttatgcg
acgcaggtgattgaagcttatctaaacgcgtactacatagtgatcctagcctgggccatc
ttctacttcttcaactgcttcaccaccgagctgccctgggctggttgtggacactattgg
aacacagagaactgtgttgactattatggagaaaatgccacaaacatcacaaacctcaac
gcaacttctccagtcattgagttctgggaacgcagagtgctgaagatatcagatggtatc
gagcacatggggggggtgcgttgggagctggccatgtgtctggccctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtatacgtgacagct
accttcccttacgtcatgttgttggtcctgttgatcagaggagtaacgctgccaggagca
ttagaaggcatcaagttctacctctacccagacatctcacgtctctcggaccctcaggta
tgggtagatgcaggaacacaaatcttcttctcctatgccatctgcttgggttgtctcact
gctctgggaagttacaattcctacaacaacaactgctacagggactgcctcatgctgtgc
tgtctgaacagcggcaccagctttgtggcaggttttgccatcttctctgtgctgggcttc
atggcctttgaacaaaatgttcccatcgaagctgtggcagagtctggtcctggtcttgct
ttcatagcgtaccccaaggctgttactatgatgcctctgtctcctctttgggccggtctc
ttctttataatgctcatctttctgggcctggacagtcagtttgtgtgtgtggagagtttg
gtgacagctgtggtggacatgtacccggagaccttcaggagaggctaccgcagagaatgg
ctgatcctcggcatgtcaatagtttccttctttataggtctcatcatgtgtacagaggga
gggatgtacgtcttccagctgtttgactcgtacgctgcgagcggaatgtgtttgctgttc
gtggccatattcgagtccatatgtatcggctgggtgtacggtagtgacagattctacacg
aacatcgaggacatgattggctacaaacctgtcttcttcatcaaatggtgctggatgatc
ctgaccccaggcatctgttctgcgattttcctgttcttcctgattaaatacaaaccgctg
aagtacaacaacgtgtacacctaccctgactggggctacggtatcggctgggccatggcc
atgtcctcgatggtctgcatccccttagggatgatctggatgatctggaagactcctggc
accttctctgagagaataaagaagttgacgactcccagcaaagatctgaaaatgagaggg
aaactcgccgccctcagtccttacgctgccaacgacgcaaaactcaaggttgatgggaaa
atatccaccatctcagagaaggagacgcatttctaa
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