Hippoglossus hippoglossus (Atlantic halibut): 117763874
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Entry
117763874 CDS
T07778
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
hhip04210
Apoptosis
hhip04217
Necroptosis
hhip04218
Cellular senescence
hhip04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117763874
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117763874
04217 Necroptosis
117763874
04218 Cellular senescence
117763874
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117763874
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117763874
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
117763874
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C2: calpain family
117763874
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117763874
NCBI-ProteinID:
XP_034445237
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All DBs
Position
1:29923866..29932007
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AA seq
702 aa
AA seq
DB search
MFGGVSGRIQKERQRAGGLGSVQQAVHYMNQDFQVLREDCVQNGSLFQDPMFPAEPSSLG
FKELGPFTAKTRGVEWKRPTELTEEPQFIVGGATRTDICQGALGDCWLLAAIGSLTLNQR
LLHRVVPHGQNFNQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGSEFWSA
LLEKAYAKLSGSYEALSGGSTTEGFEDFTGGVAEMYDLKNAPGDLHRIIIKALERGSLLG
CSIDITSAFDMESVTFKKLVKGHAYSVTGLRQVEHRGQQERLIRIRNPWGQVEWTGAWSD
SSSEWNAIDSAEKDDMLCKMEDGEFWMSFQEFLRQFSRLEICNLTPDALSQDSTSFWTTV
TFEGGWRRGSTAGGCRNHPNTFWINPQYKISLLEEDDDPDDEEATCSFLVALMQKDRRRY
RSHGQDMHTIGFAIYEIPDELQGHPSVHMKKEFFLRHSSCARSESFINLREVSNRLRLPP
GEYLIVPSTFEPSKEADFVLRVFTEKQCETREMDDDVEGTFDTEEEISESDIDDSFRSMF
TQLSGDDLEISVRELRTILNRVVSKHRDLQTDGFSMESCRAMVGLMDKDGSARLGLLEFQ
ILWNKIRKWLVIFREFDLDKSGCMSSYEMRLALENGGFKLNNKLYQMLVARYADNEVIDF
DNFTCCLVKLEAMFKTFQELNKDGTGQVEVNVIEWLLLTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggggcgtgtccgggcggatccagaaggagcgccagagggctggaggtcttggt
tcagtccagcaggcggttcactacatgaaccaggacttccaggtcctgagggaggactgt
gtgcagaacggttccctgttccaggacccgatgttcccagcagaaccgtcctcactgggc
ttcaaggaactcggaccattcaccgccaagaccagaggggtggagtggaagaggccaacg
gagctgacagaggagcctcagttcattgtgggcggtgccactaggacggacatctgtcag
ggagctctgggagactgttggctgctcgctgccattggttctctgactttgaaccaacgt
ctgctgcaccgcgtcgttcctcacggtcagaacttcaaccaacaatacgccggcatcttc
cacttccagttctggcagttcggggagtgggtggacgtggtgatcgatgatcgtctgccg
gtcaaagacggcgagctgctgttcgtccactcggccgaaggcagcgagttctggagcgct
ctgctggagaaggcctacgccaagttgagcggctcgtatgaggccttgtctggcggcagc
accaccgaaggctttgaggattttacaggcggcgtggcagagatgtacgatctgaagaat
gctcccggagatcttcatcgtatcatcatcaaagctctggagagagggtccctgctgggc
tgctccatcgatatcaccagcgccttcgacatggagtctgtgacctttaagaagctggtc
aaaggccacgcctactctgtgactggactcagacaggtggagcaccgcgggcagcaggag
cgtctgatccggatcagaaacccctggggtcaggtggagtggaccggcgcctggagcgac
agctcctcagagtggaacgccatcgactcagcagagaaggacgacatgctctgtaagatg
gaggacggagagttctggatgtctttccaggagttcctgcgtcagttctccaggttggag
atctgtaatctgacaccggacgctctcagtcaggactccaccagcttctggaccactgtg
acgtttgaagggggctggaggagggggagcaccgccggcggctgcaggaaccatcccaac
acgttctggatcaaccctcagtataagatctccctgctggaggaggatgatgaccctgat
gatgaagaggccacctgcagcttcctggtggctctgatgcagaaagatcgccgccgctac
cgcagccacggacaggacatgcacaccatcggcttcgctatctacgagattcctgacgag
ttacaaggtcatcccagtgtccacatgaagaaggagttcttcctgcgtcactcgtcctgc
gctcgctccgagtccttcatcaacctgagagaggtgagcaacaggctccgcctcccgcca
ggcgagtacctgattgtcccgtcgacctttgaaccctcaaaggaagcggacttcgtcctg
agggtgttcactgagaaacagtgcgagaccagggagatggacgacgacgtggagggaacc
ttcgacacggaggaggaaatatcagagagcgacatcgatgattccttcaggtcgatgttc
actcagctgtcaggagacgacctggagatctccgtccgagaactccgaaccatcctgaac
cgagtcgtctccaaacacagagacctgcagacggatggtttcagtatggagtcctgcaga
gccatggtcggcctcatggacaaagacggcagcgctcgccttgggctgctcgagtttcag
attctctggaacaagatcaggaagtggctggtaatcttccgagagtttgatctggataaa
tccggatgtatgagttcctacgagatgcgcctggctctggaaaatggagggttcaaactc
aacaacaagctgtaccagatgctggtcgctcgatacgccgacaacgaagtcatcgacttc
gacaacttcacctgctgcctggtcaagctggaggccatgttcaaaactttccaggagctg
aacaaagacggaacaggacaagtcgaagtcaacgtcattgagtggctgctgttgaccatg
tgtggatga
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