Hippoglossus hippoglossus (Atlantic halibut): 117768165
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Entry
117768165 CDS
T07778
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117768165 (smarcad1a)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117768165 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
ERCC3_RAD25_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
117768165
NCBI-ProteinID:
XP_034452215
LinkDB
All DBs
Position
9:complement(10530143..10541135)
Genome browser
AA seq
995 aa
AA seq
DB search
MKSKNPIRKPSVHTDNEENKLEEKTTRLKEMFPQLMREELLEVIGSTSTLEEAVDACFLK
GSDNKAPEQDRKRKLDGSSSSQDSGEIQETKKRRMSEVSDEDDDENNEPSWEKQEAMVRR
LQKKFPDQDKEELRMVLQEHDWDAEEALQVLQMFSDPDTNSSTPESEEKKSSKSNSKDKS
STDHKELRRHKDHRDSTKRNGNVNSKDHTIISETDGDSTDDTEASKDSEDESDPEDIKVS
IPNTSRASTMNTWLQKSSHPVSSSSSVKKTTTSSSLKPSSSSSSSSSSSSSSSTAQMLSR
FASGTSIAKKRAAERKTKARASDERVSSEGENDDEEDTVSSEFENSDEELDAQGAMTEIK
KEVLKFFREASRDELSLITGCSVKKALKIVELRPFNSWQSLVEVFHKANGLSESLLGGCR
LVLKERKMVLGLMVNCKTISSNMVKQVTEVMEKGTGAMKQPRILNSQLRLKPYQLIGLKW
LLLLHEHKLSGILADEMGLGKTIQAIAFLAQLYENGIEGPHLIVVPSSTLDNWVRELKLW
CPRLKVLIYCGSVEDRRYLRHDILNNKSDFHVIVTTYNLAIGNDNDRSLFRKLSLEYAVF
DEGHMLKNMSSLRYRHLMAINAQHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSTTTQLT
KMFSIKSHEEQSHFERDRTSQAKLIMKPFILRRVKSEVLKQLPAKEEKVESCSMSEKQQV
LYEKLFQKLKASTPGEKRELCNVMMQLRKMANHPLLHRQYYTTEKLKAMSKLMLKEPTHF
DADAALIQEDMEVMSDFELHRLCQRYSTISSYQLENNLLLDSGKFHYLKELLASLKNKGD
RVVLFSQFTMMLDIVEVLLKHHKHRYVRLDGSTPIADRIVLIDEFNTDPEIFVFLLSTRA
GGLGINLTSANVVILHDIDFNPYNDKQAEDRCHRVGQTRVVKVIRLISKGSIEDCILELG
QKKLKLEQDMTAAEQGGEGFIPEDMASLLKASLGL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaagaatccaattaggaaaccgtcagttcatacggataatgaggagaataag
ctcgaggaaaaaacaaccaggcttaaagagatgtttcctcagttgatgagggaagagcta
ctcgaggtcattgggagcacaagcacattggaagaggctgtagatgcctgctttttaaag
ggctctgataacaaagctccagaacaagacagaaagagaaagctggatggatccagcagt
tctcaggacagtggtgagattcaagagaccaagaagaggagaatgtcagaggtctctgat
gaagatgatgatgaaaataatgagccaagctgggagaagcaggaagccatggtgagaaga
ctgcagaaaaagtttcctgaccaggacaaggaggagctgcggatggtgctgcaggaacac
gactgggatgccgaggaggctctgcaggttcttcagatgttctcagacccagataccaac
tccagcacacctgagtcagaagaaaagaaatccagcaaatcaaatagtaaagacaagtca
agcacggaccacaaagagttgaggcgccacaaagatcacagagacagtacaaagaggaat
ggtaatgtgaactctaaagatcacacaattatcagtgaaacagatggagacagtacagat
gatacagaagcgtcaaaagacagtgaagacgaatcagacccagaagacattaaagtttcc
atacccaacacaagtagagcttccactatgaacacgtggctacaaaaaagctcccaccca
gtgtcttcgtcctcctctgtcaagaaaacaactacctcttcgtccctaaagccatcctcc
tcctcctcctcttcttcctcctcctcctcctcgtcgtccactgcccagatgctgtccaga
tttgccagtggcacgagtatagcgaagaaacgggcagcagagagaaagacaaaggcgcgt
gcctctgatgaacgtgtcagttctgaaggggaaaatgacgatgaagaggacacagttagc
agcgagttcgagaactctgatgaggagctcgacgctcaaggtgccatgacggaaataaag
aaggaggtgctcaagtttttccgggaggcatcaagagatgagctgtcgctgatcaccggc
tgttctgttaaaaaggccctgaaaattgtggagctgagacccttcaatagctggcaaagc
ctggttgaagtctttcacaaggccaatggactgtcggagagtttactcggcggctgcaga
cttgtcctcaaggagcggaagatggtgttggggctcatggtcaactgtaagactatttcc
tcaaatatggtcaaacaagtgactgaagtgatggagaagggcacaggggccatgaaacag
cccagaatactcaacagccagttacggctgaagccatatcagctgattggtctgaagtgg
ctgctgctcctgcatgagcacaagctcagcggtatcctggctgatgaaatgggtttgggg
aaaactatccaagccatagcgtttctggcccagctatacgagaatggaatagagggtcct
catctcatcgttgtgccgtcctctacgctcgataactgggtcagagagctgaagctgtgg
tgcccacgcctcaaagttctaatctattgcggatctgtggaggaccgccgctacctcaga
cacgacatcctcaataacaagtctgatttccatgtcatagtgaccacatacaatttggcg
ataggaaacgataacgaccgcagccttttccgcaagctgagtctggagtatgctgtgttt
gatgaaggtcacatgctgaagaacatgagcagcttgcgctaccgccacctcatggctatt
aatgcacagcatcgtttgctgctgacaggaactcctttacagaacaacctcttagagttg
atgtctctcctcaacttcatcatgccttctatgttctccagcaccacgacacagctcacc
aaaatgttttctattaaatctcacgaggagcagagccattttgaaagggatcgtacttct
caggccaaactcatcatgaaaccgtttatcctccgaagggtcaagagtgaggttttaaag
cagctgccagcgaaggaggagaaggtggagtcctgctcgatgagtgagaagcagcaggtg
ctgtacgagaaactctttcaaaaactcaaggcctccacccctggcgagaagcgggagctg
tgtaatgtgatgatgcagttgaggaagatggccaaccacccactgctccacagacagtac
tacaccacagagaagctcaaagccatgagcaaactcatgctcaaggagccaactcacttt
gatgcagatgcggctctgatccaggaggacatggaggtgatgtcagactttgagctgcat
cgtctgtgccagcgatactccaccatcagctcctaccagcttgaaaacaatctcctgctt
gactctgggaagttccactacctcaaagagcttctggcctctctaaaaaacaagggcgac
agagtggtattattcagtcagttcaccatgatgctggacatcgtggaagtgctgctgaaa
catcacaagcatcgttacgtccgactggatggatctacacccatagccgacaggattgtg
ttgattgatgagttcaacacggaccctgaaatatttgtgttcctgttgtcaactcgtgct
ggaggcctgggcatcaacctcacgtcagctaatgtcgtgattctacatgacatcgacttc
aacccctacaatgacaaacaggcagaggacaggtgtcaccgtgtgggacagaccagggtt
gtgaaggtgattaggctgatcagtaagggcagcatagaggactgcattctggagctggga
cagaagaaactaaagctggagcaggacatgactgctgctgaacagggtggtgagggattc
ataccggaagatatggcatctttactcaaagcttcactgggactgtga
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