Hippoglossus hippoglossus (Atlantic halibut): 117768871
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Entry
117768871 CDS
T07778
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117768871 (sh3tc2)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117768871 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_1
TPR_MalT
TPR_2
SH3_2
SH3_1
TPR_7
TPR_10
SNAP
HEAT_Nup120
PDGF_N
Motif
Other DBs
NCBI-GeneID:
117768871
NCBI-ProteinID:
XP_034453176
LinkDB
All DBs
Position
10:9682339..9703190
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AA seq
1601 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSSCCGPLIKVCLSSFTDISPAELDALWREPPYTLGG
TNDPFSGNDIMTQGGGEEEDGVVVESGEGEVEPESYWKKKEAFFRGSTVSLGDKFSSEIV
LLFTGRRRSSVDPDRTLQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTF
KTVEEIWKFSTYLALGYVARCLENFLSDQSFWLDPELLSDLEINVSVDEEHLATLYLGLL
LQEGSFFAKALFTRSEEYEEEEEQLSFKKNDLLMVRDTGQDNMREGTMLSTGNHGLVPVD
AMQPLPYPFYQWFLRKYPGSAGCSPTEKEQFEHPIVTGSCVAVVDYCPLGPDELQLNQGD
IVEVQGLLVRGLGVFIGTHTSTGRIGFIQKAHVKPLDTMALDGQLVFLTAEERASLAQVN
PCSSESRDCGLLERLFSSDISSVYRLDRLDETDFLYIRNQPKHEHKVSSSTRQSVFSEQS
ERSGGTPPSQSSPRASLSLSSPRLSLYRSQNPLPYEGEHLCFALEDTFRELDEFQEDPPL
FSEENSWEGEESEISDPTLTLLNREHFQEDFLPLYDLQYSFLWVTFSGKTEDELSGHLES
VRECAKRMGMHWAHRRACFLLGRLCARKLKLSQARVYYEEALSVCVDSFSDTPLLVALFT
NLTSIYLKQRMTDKLPQTLEKASALLLCLPGHTFTSMDEVELLMLLLRRSVVMGDKSLEA
RVCYLTSSLFLLLKKSDDALPFIERLQFLSVTLSAAEGQPIVPLDLNWLLSRLYHRKYMP
YLALASLSLDSRKDHSLHDAFQRIELFIRNSVRLNPCWKEGTSLLPAQIVVYLQQALALA
EQGEDMKTQRDLCLGLASVYQQYNALDKAVRCAHQAVEMGGHINEEEGFEASVLLGSLLV
LTGQAERAQSVLQPLLSSLQGTDSPTQRGVIHNLLALCLRRQGRVPEAGWHLHSALMISR
ESGNQRNQALALANLGCLALDVGASWVAERFLVRSLHLFHGLWESPTDEEHVQTYLWLGR
SYKDRGRRQDIRACYEMGLLIALQARNLHSQMLVAKVLSRLYADMLLYGQSIVYYEHCVS
VSRQLKDKRLEGEYLEILSSLYLSLNTERSSRKSLDYTKQSLRISIDLGKREEESETWLQ
VGRIYYLIHEDELADMYLQAAVKTALRMNDPHFAMSIYEEAGDVYFKGHRNHMASLPFFR
DGSLPFARSIKDIHSEFRLLSKLTELLMNQGEQEEALQYATLAVQVASNTGVPVNERTAY
HRLATVYYSLQQYEMAENYYLKSLSLCPPVLQHPTQAHYYTKVYCRLGNITLHKLKDAFD
AVGYFHLALAAALEDGAHPEALYVVYMKLAEIHGNHMPDAQLCQVYRDRAQSLKRVLAGE
GGGGDHADTEAGQQREQDLGHTDSLNKRNYIFDSIPEDETYELSSAPRTCMRHVDRKISC
IDTNIGDAHGKDDHNQNLPDTDGPNLDGCETDTIASQSYSDSTFTESFDTAKEQISDSSS
STDTLQTQNFDTDHSTTSQMPANSTDDITGHMDARDTDPDIQDEQNTHACADPVQKDVSV
TDMQPDADHTETVSMKPDLTVSVDDCTEKDHPETGDTNTRA
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcttgggccagatggcgtcttgttgctgcaga
ccgctgctcaactcttcctgctgtggaccgctcatcaaagtctgcctctcctccttcaca
gacatctctcctgctgagctggacgctctctggagggaaccaccgtacactcttggggga
acaaatgatcccttctcagggaatgacatcatgactcaaggtggaggtgaggaggaggat
ggtgtcgtggtggagtcaggggaaggagaggtggagcctgagagctactggaagaagaaa
gaagccttctttagaggaagtactgtgtcactgggagataagttctcctcagaaattgtg
ctgttgttcactgggcggaggcgctccagcgtagatcctgaccgaaccctacaggaggcg
ctacgcacacgactgcgagtggtggagagcaacagccaggacgtgatccagctctttaag
gacttgtctgcacgtctggtgtctgtccacgctgagaaagacagctttgtgctcacattc
aagactgtggaggaaatatggaagttttcaacgtacctagcattgggttatgtggctcgc
tgcttggagaacttcttgagtgatcagtccttctggctggacccagagctgctcagcgac
ctggagatcaatgtgagcgtggatgaggaacatctggctactctgtacctgggacttcta
ctgcaggaaggatccttctttgcaaaggcgctatttacgagaagcgaggagtatgaagaa
gaggaagaacagctgtcgttcaaaaagaatgacttgctcatggtaagggacacagggcag
gacaacatgcgggagggcaccatgctctctacaggaaaccacggcctggtgccagtcgat
gccatgcagccactaccctaccccttctaccagtggttcctgaggaagtacccaggctct
gctggatgctcgccaacagaaaaggaacaatttgaacatccaatcgtcacaggttcctgt
gtggcagtggttgactactgtccactggggccggatgaactccagctgaaccaaggtgac
atcgtggaggtccagggtctgctggtccgaggtctgggcgtgttcataggaacgcacaca
tccacaggacgcattggttttatacagaaggcccacgtcaagcctctggacaccatggcc
ctagacggacaattggtctttctgacggcggaggagagggccagcctggctcaggttaac
ccgtgcagctctgagtcaagggactgcggcctgctggaacgactcttctcctctgacatc
agctctgtgtacaggctagacagactggacgagactgacttcctgtacatcaggaatcag
ccaaaacacgaacataaggtttcttcgagcacgcgtcagagtgtcttttcagagcaaagc
gagagaagtggagggacgcccccgtcccaatcctccccacgtgcctctctgtctctctcc
tccccccgcttgtccctctaccgctcccagaatcctctgccctatgagggcgagcacctg
tgcttcgccctggaggacacgttcagggagctggatgagttccaggaggatccacctctc
ttctcggaggagaacagctgggagggggaggagtctgagatcagtgaccccacgctgacc
ctgctcaatcgtgaacacttccaggaggacttcctgcctctgtatgacctgcagtattcc
ttcctgtgggtgaccttcagtggtaagacggaggacgagctctcgggtcacctcgagagt
gtcagggagtgcgccaagaggatgggcatgcactgggcacatcgccgggcatgcttcctc
ctgggaaggctctgtgccaggaaactaaagctctcacaggcacgggtgtactacgaggag
gctctgagcgtttgcgtggacagtttctctgacacgccactcctcgtcgccctcttcaca
aacctcacctccatctacctgaagcagcgcatgacagacaaactgccccagactctggag
aaggccagtgctctgctcctctgtctccccggccacaccttcacctccatggacgaggtg
gagctgctaatgctgctcctgaggagatctgtggtgatgggggacaagagcctggaggct
cgtgtctgctacctcacctcgagcctcttcctgctcctcaagaagtcagacgacgctctt
cccttcattgagagactccagtttctctcggtgactctttctgctgctgaggggcaaccc
atagttcccctggacctcaactggctcttgagccggctctatcatcgtaaatacatgcct
tacttggcgctggcctctctgagcctggactccagaaaagaccactccctccacgatgcc
ttccagaggattgagttgtttatcaggaactctgttcgcctgaatccgtgctggaaggaa
ggaacctcattgctccccgcccagattgtggtttaccttcagcaagccttggctctagct
gagcaaggagaggacatgaagacccagagggacctgtgtttgggcttggcctcagtctat
cagcagtataatgctctggacaaggcggtacgctgtgctcatcaagctgtggagatgggc
ggccacattaatgaggaggagggctttgaggcctctgtgctgcttgggtcgctgctggtg
ttgacaggacaggctgagagggcccagagtgtcctgcagccactgctctcatcacttcag
ggtacagacagccccacgcagcgcggagtgatccacaacctcctggctttgtgtctgagg
cgacagggtcgtgtcccggaggcaggatggcatctgcactcagccctgatgatctccagg
gagagtgggaatcagaggaaccaggccctggctttggccaacctgggctgcctggcgctg
gatgtaggggcatcatgggtagcagagcgtttcctcgtcagatcactgcacctttttcat
gggctgtgggagagccccacagacgaggagcacgttcagacctacctctggctggggcgg
agctacaaagacagggggaggagacaggacatcagggcgtgctatgaaatgggactgcta
attgcactacaagccagaaacctgcacagtcagatgttggtggccaaggtgctgagtcgg
ctgtatgccgacatgctgctgtacggtcagagcatcgtctactacgagcactgtgtgtcc
gtgtccaggcagctgaaggacaagagactggagggggagtacctggaaatcctcagcagc
ctctacctgtcactcaacacagagagatcatcacgtaagtcgctggactacaccaagcag
agcctgcggatttctattgatttgggcaagagagaggaggagtcagagacctggttacaa
gtgggacgtatatattatctcatccacgaggacgagctggctgacatgtacctgcaggca
gcagtgaaaacagccctgaggatgaacgaccctcactttgccatgagcatctacgaggag
gcgggagacgtttactttaaaggccacagaaatcacatggcttccctgcctttcttcagg
gacggcagtctgccattcgcacgcagcatcaaggacatccactcagagtttcgtctgctg
agtaaactgactgagctgctgatgaaccagggggagcaggaggaggctctgcagtacgcc
accttggccgttcaggtcgccagcaacacaggtgtgcctgtgaatgagaggacagcctac
caccgactggccacagtctactacagcctgcagcagtatgagatggcagaaaactactac
ctcaagtccctgtccctctgccccccggtcctgcagcaccccacacaggctcactattac
accaaggtctactgcagactgggaaatatcaccctgcacaaactgaaggatgcttttgac
gcagtgggctacttccatttggctctggcagcagccctggaggacggcgctcaccccgag
gccctgtatgtggtgtacatgaagctggcggagatccacggcaaccacatgcccgacgct
cagctgtgccaagtttacagagacagagcccagagtctgaagagagtgctggccggagag
gggggagggggagaccatgcagacaccgaggccggccaacagagggagcaggacttggga
catacagacagtttgaataagagaaactacatcttcgattctatacctgaagatgaaacg
tatgaactaagctcggccccaagaacttgcatgaggcatgtggacagaaagatcagttgt
atagacactaatatcggagatgctcatgggaaagacgatcacaatcaaaatctccctgac
acagacggccctaacctggacgggtgtgagacagacaccatcgccagtcagtcgtacagc
gacagcaccttcactgagtcgtttgatacggcgaaggagcagatctctgactccagcagc
tccaccgacacactacaaactcagaactttgatactgaccacagcacgaccagtcaaatg
cctgctaattccaccgatgacatcacgggacacatggatgcaagagacaccgatcctgac
attcaggatgaacaaaacacacacgcttgtgcagatcctgttcaaaaagatgtcagcgtg
acagacatgcagcctgatgctgaccacacggagactgtcagcatgaaaccagatctgact
gtaagtgtggacgactgcacagagaaagatcatcctgagactggagacacaaacacaagg
gcttag
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integrated database retrieval system
