Hippoglossus hippoglossus (Atlantic halibut): 117774565
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Entry
117774565 CDS
T07778
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117774565 (trpc4a)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117774565 (trpc4a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
117774565
NCBI-ProteinID:
XP_034462981
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All DBs
Position
14:5585480..5613518
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AA seq
949 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKHALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEENNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRQWAGKFFTCVFIGLLYPGFALCYLIAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKSFLYLICWIKRQVCKRTNSKRPDTFGSLGRRAAENLRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPALQGAKASGSSVESS
LAYPNSSLKVSPGPQSSQAKSKSNRFKITASILKMGSSTASPRPPEVFNGLPNGLLPLEP
DESTSDKSGQRRTFPKDITDFGLFQKRHRNEATSGAEETSRKMYSLSEEAGESGGSDAEE
RDKERTAGGEEETKLSGGEMAEEAAVTAADIEDGEVSNTKYGSEEDKEK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactatcggcggactgacagctcctcgtaccgggaccgcatcccgctg
aggatcgtgcgggccgagtcggagctgtcgcctctggagaaagcctacctcggagctgtg
gagaagggcgactatgcgagtgtcaaacacgctctggaggaggcagagatctactttaag
atcaacatcaactgcatcgaccctctcggccgcacggctctgctgatcgccatcgagaac
gagaacctcgagatcatcgagctcttgctgagcttcagcgtctacgtcggcgatgccctc
ctgcacgccatccgcaaggaagtggtgggagctgtggagctgctgctaaatcacaagaag
cccagtggcggcatgcaggttcctcccatcttattggacaagcagttctccgacttcacc
cccgacatcactcccatcatacttgcggcgcacaccaacaactatgaaattatcaagctc
ctggtgcagaaaggcgtttcaatgccgcagccgcatgaggtgcgctgcaactgcgtggag
tgcgtgtccagctcggacgtggacagcttgcgtcactcgcgctctcggctcaacatctac
agggcgctgtccagtccctccctgatcgctctctccagcgaggaccccttcctcactgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagttcaaatctgag
tacgaggagctgtcccagcagtgcaaacagtttgccaaggacctgctggaccagaccagg
agctccagggagctggagatgatcctcaactacagagacgacatcaacctgttggaggag
gagaacaacaacgacctggcgagactcaaactagctatcaagtatcatcaaaaagagttt
gtagctcagccaaactgccagcagctgttggcgtcgcgctggtacgacgagttccccggc
tggaggcggcgacagtgggctgggaagttcttcacctgcgtcttcatcggcctcctctac
cccgggttcgcgctctgctacctcatcgctccgaagagtcgctacggcctcttcatccgc
aagcccttcatcaagttcatctgccacacggcgtcctacctgaccttcctcttcctgctg
ctcctcgcctcccagcacatcgtcaccacagagcaggaccggcaggacaggcagggcccg
gcacccaccaccgtggagtggatgatcctgccctgggtgctgggattcatctgggccgag
atcaagcaaatgtgggatggtggtttccaagactatgtccacgactggtggaacctgatg
gactttgtcatgaactctctatacctggccaccatctccctcaagattgtagcctacact
aagtacagcggcagtaaacccaggaaccagtgggagatgtggcacccgacgctcgtagct
gaggcggtgtttgccatcgctaacatcttcagctccctgcgcctgatctcgctgttcaca
gccaactctcatctggggccgctgcagatctctctggggagaatgctgctggacatcctg
aagttcctcttcatctactgtctggtcctgctggccttcgctaacgggctgaaccagctc
tacttttactacgagaccaaggcctcggacgagaaggggaaatgtaagggcatccgctgt
gtggagcagaataacgctttctccacgttgtttgagaccctgcagtctctcttctggtcg
atcttcggcctgatcagcctctacgtcaccaacgtggacgccgaccaccagttcaccgag
tttgtcggcgccaccatgtttggcacctacaacatcatttcactggtggtgctcctcaac
atgctcatcgccatgatgaacaactcctatcagcacatcgctgaccacgcagacatcgag
tggaagttcgccaggacgaagctgtggatgagctactttgaggaaggggccacgctgccg
gccccgttcaacatcatccccagccccaagtccttcctgtacctcatttgttggattaag
aggcaagtgtgcaagaggaccaactccaagcggcccgacacctttggatctctcggaagg
cgagcagcggagaatctgaggataaaccatcaatatcaggaggtgctgaggaatttggtg
aaacgttacgtggccgcaatgatccgagacgctaagacagaggaaggactgactgaagag
aacttcaaggagctgaaacaagatatctccagcttccgttacgaggtgatgggcatgatg
aagacggggaagcctgccctgcagggggcgaaggccagcggcagctcggtggaatccagc
ctcgcttaccctaactcctcgctcaaggtttcccccggccctcagagcagccaggccaaa
agcaaaagcaacagattcaagatcaccgcctccatcctcaagatgggcagctccacagcg
tcacccaggccgccagaggtcttcaacggtctgcctaacggactcctgcccctggagccc
gatgaaagcaccagtgacaagtcaggccagaggaggaccttccccaaagatatcaccgac
tttggcttgtttcagaaacgccaccgcaacgaagccacatcgggcgcagaagagacttcc
aggaagatgtactctttatcagaggaagcaggggagtctgggggctcggacgcagaggag
cgggacaaagagcgaacggccggaggcgaggaggagacaaagctctcagggggagaaatg
gcggaggaggctgcggtgacggcggcagacatcgaggatggcgaggtctcaaataccaag
tacggctcggaggaagacaaggaaaaatga
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