KEGG   Halorhodospira halochloris: HH1059_05070
Entry
HH1059_05070      CDS       T06158                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
hhk  Halorhodospira halochloris
Pathway
hhk02024  Quorum sensing
hhk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HH1059_05070 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HH1059_05070 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhk03019]
    HH1059_05070 (hfq)
   03036 Chromosome and associated proteins [BR:hhk03036]
    HH1059_05070 (hfq)
Messenger RNA biogenesis [BR:hhk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HH1059_05070 (hfq)
Chromosome and associated proteins [BR:hhk03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HH1059_05070 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Hemocyanin_N
Other DBs
NCBI-ProteinID: BAU57191
UniProt: A0A120MZJ2
LinkDB
Position
521875..522147
AA seq 90 aa
MSKGQSLQEPFLNTLRKEKVPVSIYLVNGIKLQGQIESFDQFVVLLRNNVNQMVYKHAIS
TIVPARRVRIPALGDDQPTDLEHGQEESDR
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcagtcactgcaagagccgtttctaaataccctgcgcaaggagaaggtg
ccggtatctatatatttggttaatgggataaagcttcagggccagatcgaatccttcgat
caatttgtggttttattgcgcaataatgtaaatcagatggtctataaacatgcaatctca
actatagtcccggcgcggcgggtgcggatacctgcgcttggggacgatcagcctaccgac
cttgaacacggtcaggaggagagcgatcgctga

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