KEGG   Helicobacter pylori Shi112: HPSH112_00250
Entry
HPSH112_00250     CDS       T02037                                 
Name
(GenBank) Proline/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hhp  Helicobacter pylori Shi112
Pathway
hhp00250  Alanine, aspartate and glutamate metabolism
hhp00330  Arginine and proline metabolism
hhp01100  Metabolic pathways
hhp01110  Biosynthesis of secondary metabolites
Module
hhp_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HPSH112_00250
   00330 Arginine and proline metabolism
    HPSH112_00250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hhp03000]
    HPSH112_00250
Enzymes [BR:hhp01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     HPSH112_00250
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     HPSH112_00250
Transcription factors [BR:hhp03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    HPSH112_00250
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AFI00292
LinkDB
Position
complement(49744..53301)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSSFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEASARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
VKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWEDQEQRFLNSLKGIATLDNATHRTQDRNAKQSGHTTYPNHSFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHKKIASVHL
ADREAILKALEVAKSDKNRFSQKSFTEIHALMSQTAQIFRERRGDLIGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVVIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTG
GEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGTLADKPNEKVIKAIDELKSYENYE
IPVSFVNDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMKAQDLDEAIDIVNSTGYGLT
SALESLDEREWEYYLKRIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVNIHQEEEDENALKNPLSEALEGLTQKGYDEHTHELRRAIFMAKSYAYHYKHEFSQAK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTLSIENERANKDL
SFFLECLKALRANAPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHEQASALGIVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcattagaattagccaaaaaactgcaagatagtatcagt
aaccatttgagcgagcaagaaaaagcgttccactctaaaatgcaaaagcttttaaataac
cctgaaaacaaagtcatgctcatagagcttatggatcggagttttagatgcctggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tcttcatttgaaaaattgcttttaatggggtttttaagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaatcagaagcgacacgaaagcgatggtcttggat
caagaagagagccaattaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aatgtgaattttattggcgaagaggttttaggcgaagaagaagctagtgcgcgttttgaa
aaatactctcaagccctaaaatccaactacattcaatacatttccattaaaatcacaacg
attttttctcaaatcaatatccttgattttgaatattctaaaaaagagattgtcaaacgc
ctagacgctctttatgccctagctttagaagaagaaaaaaagcaaggcatgcctaaattt
attaatttggatatggaggaatttagggatttagagctcacggtggagtcttttatggaa
tccatcgctaaatttgatttgaacgctggcattgtgttgcaagcctatatcccggattct
tatgaatatttaaaaaaactgcacgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgctttgttaagggagcgaacatggagagcgaagagactatcgcttcc
gtgaaagactgggcgttacccacattttccaataagcaagacaccgattctaattacaat
aaaatgctggattttgttttagagggcgataattataaatacattcatattggtgcagca
agccataatatttttgaaatcgcttatgtttatacgcgcatccatgcccttaatgaccct
gttgtgttagagcattttagctttgaaatgctagagggcatgagtttgcaagcgagccag
gaactaaaagagatgcacaaactcattctttatgcaccggtgtgcgatgaagcgcatttt
aacaacgcgatcgcttacttggtgaggaggttagatgaaaacacctcaagcgataatttc
atgaaggctttctttaacctcaaagtaggcacgagcgaatgggaagatcaagagcaacgc
tttttaaacagccttaaaggaatcgctactttagacaatgccacccacaggactcaagat
agaaacgccaaacaaagcgggcataccacctacccaaaccactcctttaaaaacgaaagc
gataccgattttattttaaaagccaaccgagaatgggctaaaaaagtgcgcgaaaaaatg
cataacgcccctattttagagctttacccagaaatggatgggaggtttgaagatcctaat
ttaacccctttagaagtctttgataaaatccatcataaaaaaatcgctagcgtgcattta
gcggatagggaagcgattttaaaagccctagaagtggctaaaagcgataagaaccgtttc
agccaaaaaagctttacagaaatccatgccttaatgagtcaaaccgcccaaatttttaga
gaaaggcgaggcgatttgatagggatttcggctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttagagttttacccttacagcttaagg
gtgttgcaagagcaaaataaaaaaacgaaattcacccccaaaggcgtgggtgtggtcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgct
ggcaatcgggtgatttacaagccctcaagtttgtctagcgtaacgggttataagctttgt
gagtgcttttgggatgcgggcgtgcctagagatgcactcatttacttgccctctaaaggg
agcgatattagcgagcatcttttaaaagatgaaagcatcaagtttgccattttaacaggg
ggcgaagacaccgcttataaaatgctagaagctaaccccactttagccttgagcgctgaa
acaggcggtaaaaacgccactattgtgagcaaaatggcagacagagatcaagcgattaag
aatgttatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtgttggaaaaagaagtctatgaagatgagaactttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcactctagcggac
aagcctaatgaaaaggtcattaaagccatagacgaattgaaaagctatgaaaattacgaa
atcccggtaagctttgtcaatgataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
aaagcgcaagatttagacgaagcgatagacatagtcaattctaccggttacgggctgacg
agtgcgttagagtctttggacgaaagggagtgggaatattatctaaaacgcattgaagcc
ggtaatatctatatcaacaagcccaccacaggagcgattgtcttacgccagccttttggg
ggggttaaaaaatccgctgtggggtttgggagaaaggtgggcatttttaactatatcacg
caatttgtgaatatccaccaagaagaagaagatgaaaacgccctaaaaaaccccttgagc
gaagctttagagggcttgactcaaaaaggctatgatgagcatacgcatgagttgaggcgc
gcgatttttatggcaaagagttacgcttatcattacaagcatgaattcagccaagctaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacactaaagttaaaagcgtg
ggctatcgcatcaccgaaaaggacaccttaagcgatatgttaggcgttgctttagcatgt
ttaatttctcaaatccctttaacgctcagcatagaaaacgaacgagcgaacaaagattta
tcatttttcttagaatgcttaaaagcgctccgagcaaacgcccccattgtttatgaaagc
ttgcaaaaatttagcgagaaattgaacgctttcaatcgtgtccgttatttaaaaagcgat
ttggatttattgcacgaacaagcaagcgccttagggattgttttagccacggctaaaccc
tgcctaaacgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcatcgttacgggaatttaggctcaagggttttaaggcaaccaacttgccacaaatca
tgttgtgctgaaaaataa

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