Helicobacter pylori Shi112: HPSH112_05280
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Entry
HPSH112_05280 CDS
T02037
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPSH112_05280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhp03400
]
HPSH112_05280
Enzymes [BR:
hhp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPSH112_05280
DNA repair and recombination proteins [BR:
hhp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPSH112_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
AAA_19
ADDB_N
PriA_3primeBD
AAA_22
nSTAND3
PhoH
AAA_7
AAA_30
zinc-ribbons_6
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AFI01252
LinkDB
All DBs
Position
complement(1091193..1093052)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKERHQKGALVNIHLRNKMLLGVVLGEVSKPSFECLELEKT
PYFLLPFQIELAIFIAQYYSANLSSVLNLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKKVFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKNKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttgatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaggagcggcaccaaaaaggagcgttagtcaatatccatttgaggaataaaatgcttttg
ggcgtcgttcttggagaagtttcaaaaccctcttttgaatgcctagaactagaaaaaacc
ccttattttttactcccctttcaaatagagctcgctatatttatcgctcaatattactcg
gctaatctttcttcagtcttaaatctttttaccccttttaaagaatgcgatttggtgggg
ttagaaaaaattgagcccgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcttgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgcattattgttagtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaaaggtttttaaagaaaat
ttgggcttgtggcatagcaaactctctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttaccccttaag
gagttgggtttaatcattgtagatgaagagcatgacttttcttataaatctcatcaaagc
cctatgtataacgctagggatttgtgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaaaataaggcttta
gtacgcttaaaggggcgctacacgcctacacaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagcgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgttac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagcgcgtgtcaa
agcgaagttttagtgggtaaaaggataggcaccatgcaagtgctaaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcacaccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatccaatagttacagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagagtttaagcataaaaac
gaagaaaaagcccaacaattgagcctgaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctagctttaaagcccccattgaaaaaatcgcttcttcttaccgc
taccttattttattgcgttctaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccccaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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