KEGG   Herbaspirillum hiltneri: F506_01105
Entry
F506_01105        CDS       T04039                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hht  Herbaspirillum hiltneri
Pathway
hht03030  DNA replication
hht03410  Base excision repair
hht03420  Nucleotide excision repair
hht03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F506_01105
   03410 Base excision repair
    F506_01105
   03420 Nucleotide excision repair
    F506_01105
   03440 Homologous recombination
    F506_01105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hht03032]
    F506_01105
   03400 DNA repair and recombination proteins [BR:hht03400]
    F506_01105
Enzymes [BR:hht01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F506_01105
DNA replication proteins [BR:hht03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     F506_01105
DNA repair and recombination proteins [BR:hht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     F506_01105
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F506_01105
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AKZ61453
LinkDB
Position
245307..248093
AA seq 928 aa
MQKTLLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYIACIFDA
KGKTFRDDLYAEYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLGVR
AAEEGLKTIVSTGDKDMAQLVNDHVTLVNTMSNETMDRAGVIGKFGVPPERIVDYLSLIG
DTVDNVPGVEKCGPKTAVKWLTQYDSLDGVIANADKISGVVGENLRKALPWLPQARVLVT
VKTDCDLSAHMGTILESLTVQPNDNAALREIFTRYNFRTWLRELDAASASGADAAAKPAS
ASATGAVAADAATGPAQVGLFDASAAIAKEYETVLTEAQLDAWIATINAAKLTAVDTETT
SLVPMQAQLVGISLCCEAGRAAYIPVAHNYQDMPAQLPRELVLARLKPWLEDDSKPKLGQ
NLKYDSHIFANQGIQLRGIVHDTLLESYVFESHRTHDMDSLALRHLNRTTISYTDVCGKG
ASQIGFDQVEIGRATDYAAEDADVTLALHQAMWPQVENDAKLRYIYEKIEVPTSVVLQKI
ERNGVLIDAAILATQSNELGKRMLEIEQQAYELAGQPFNLNSPKQLGEILFEKLQLPVVK
KTPSGTPSTDEEVLQKLAEDYPLPKILLDYRGLSKLKSTYTDKLPKMVDPTTGRVHTNYA
QAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFIAPPGSTIVSADYSQIELRIMAHISED
ANMLKAFADGEDIHRATAAEIFGVGLGDVTSEQRRYAKVINFGLIYGMSAFGLAGNLGIE
RSAAQMYIDKYFQRFSSVKQYMDNTRLEAKSQGYVETVFGRRLWLPEINSPNGPRRQGAE
RAAINAPMQGTAADLIKLAMISVQGWIERDGLQSKLIMQVHDELVMEVPDAELALVREKL
PELMKNVAELKVPLIAEVGTGKNWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgcaaaaaaccttgttgttagttgatggttccagttacctctatcgtgcattccatgct
ctgcccgacatgcgtaacgcggaaggcgcgccgaccggtgcgttgtacggcatcatcaat
atgctgcgccgactgcgtaatgattatcctgcaagttacatcgcttgtatattcgacgcc
aagggcaagactttccgcgacgacctgtacgccgagtacaaggctacacgcaaatcgatg
ccggaagatctggcgttgcaaatcgaaccgatccacgcagccgtgcgcgcgctcggctgg
ccgatcttgatggtcgaaggcatcgaggccgacgacgtcatcggcacgctgggcgtgcgc
gccgccgaagaaggactcaagaccatcgtctccaccggcgacaaggacatggcgcaactg
gtcaacgaccacgtcacgctggtcaacaccatgagcaacgaaaccatggatcgcgccggc
gtgatcggcaaattcggcgtaccgccggaacgcatcgtcgattacctcagcctcatcggc
gacactgtcgacaacgttcccggcgtcgaaaagtgcggccccaaaaccgccgtgaaatgg
ctcacccaatacgactcgctcgacggcgtcattgccaacgccgacaagatcagcggcgtg
gtcggcgagaacctgcgcaaggccttgccctggctgccgcaagcgcgcgtgctggtgacc
gtgaagaccgactgcgatctgtcggcgcacatgggcaccatccttgagtcgctcaccgtg
caacccaatgacaatgcggcgctgcgcgagattttcacgcgctacaacttccgcacctgg
ctgcgcgagctggacgcggcttcagcttcgggtgccgatgctgcagccaagccggcatct
gcatctgcaaccggcgcggtcgccgccgatgctgccacaggtcccgcgcaagtcggcctg
ttcgacgccagcgcagcgatcgccaaggaatacgaaaccgtcctgaccgaagcgcaactc
gatgcctggatcgccaccatcaatgcggccaagctcactgcggtggacaccgaaacaact
tcgctggttcccatgcaggcgcaactggtcggcatttcgctgtgctgcgaagcggggcgt
gcggcttacattccggtcgcgcacaactaccaggacatgccggcgcaactgccgcgcgaa
ctggtgctggccaggctcaagccttggctggaggacgacagcaagcccaagctcggacag
aatctcaaatacgacagccacatcttcgccaaccagggcatacagttgcgtggcatcgtg
cacgacacgctgctggaatcctatgtgttcgaatcgcaccgcacgcacgacatggacagc
ctggcgctgcgccatctgaaccgcaccacgatcagctacaccgacgtgtgcggcaagggc
gcttcgcaaatcggtttcgaccaggtcgagatcggacgcgccaccgactatgcggcggag
gatgccgacgttacactggcgctgcaccaggccatgtggccgcaagtcgagaacgacgcc
aagctgcgctatatctacgaaaaaatcgaagtaccgacctcggtggtgctgcaaaagatc
gagcgcaacggtgtactgatcgacgccgccatcctcgccacgcaatcgaatgaactcggc
aagcgcatgctcgagatcgagcagcaggcgtatgaactcgcgggtcagccgttcaacctg
aattcacccaagcagctcggtgaaatcctgttcgagaaactgcaattgccggtcgtcaaa
aagacgccgtccggcacgccgtccaccgatgaagaggtactgcagaaactggccgaagat
tatccgctgccgaaaatcctgctcgactatcggggcttgtccaagctgaagtcgacctac
accgacaagctgccgaagatggttgatccgaccaccggccgcgtgcacaccaactatgcc
caagccgtggccgtcaccggccggctggcgtccaacgatcccaacctgcaaaatatcccg
attcgcaccgccgaaggccgccgcatccgcgaagccttcatcgcaccgccgggcagcacg
atcgtttccgccgactattcgcaaatcgagttgcgcatcatggcgcacatctcggaagac
gcgaacatgctcaaggcctttgcagacggcgaagacattcaccgcgccaccgccgccgaa
attttcggcgtcggtctcggcgacgtcaccagcgagcagcgccgctatgccaaggtcatc
aacttcggcctgatctacggcatgagcgctttcggcctggccggcaatctcggcatcgaa
cgttcggcggcgcagatgtacattgacaagtatttccagcgcttctccagcgtcaagcaa
tacatggacaacacgcgccttgaagccaagtcgcagggctacgtcgaaaccgtattcggc
cgccgcctgtggctgcccgagatcaactcgcccaacggcccgcgccgccagggcgccgaa
cgggcagcgatcaacgcgccgatgcagggcaccgccgcggacctgatcaagctggcaatg
atttccgtgcaaggctggatcgagcgtgacggcctgcaatccaaactgatcatgcaggtg
cacgatgaactggtgatggaagtgccagatgcggagctggcgctggtgcgcgaaaaacta
ccggaactgatgaaaaatgttgcggagctcaaggtgccgctgatcgccgaagtggggacc
ggcaaaaactgggaccaagcccattaa

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