Hyaena hyaena (striped hyena): 120229071 Help Entry 120229071         CDS       T07257                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism hhv  Hyaena hyaena (striped hyena) Pathway hhv04151   PI3K-Akt signaling pathway hhv04510   Focal adhesion hhv04512   ECM-receptor interaction hhv04611   Platelet activation hhv04820   Cytoskeleton in muscle cells hhv04926   Relaxin signaling pathway hhv04933   AGE-RAGE signaling pathway in diabetic complications hhv04974   Protein digestion and absorption hhv05146   Amoebiasis hhv05165   Human papillomavirus infection hhv05205   Proteoglycans in cancer hhv05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:hhv00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     120229071 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120229071 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120229071 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120229071 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     120229071 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     120229071 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     120229071 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     120229071 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     120229071 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     120229071 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     120229071 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     120229071 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hhv00536]     120229071 (COL1A1) Glycosaminoglycan binding proteins [BR:hhv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120229071 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  120229071 NCBI-ProteinID:  XP_039083754 LinkDB All DBs Position Unknown AA seq 1460 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD NGNVLCDDVICDETKNCPGAHVPPGECCPVCPDGEASPTGQETTGAEGPKGDTGPRGPRG PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGGISVPGPMGPS GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSE GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS GPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPP GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP GAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVP GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP GLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEA GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA GPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKE GGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP GQRGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP GRDGSPGPKGDRGETGPSGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGAR GPAGPQGPRGDKGEAGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP GAAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWYISKNPKDKRHV WYGESMTDGSQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGNWGKTVIEYKTTKTSRLPIIDVAP LDVGAPDQEFGFDVGPACFL NT seq 4383 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc ctcaggtactatgaccgagatgtttggaaacccgaggcctgccggatctgtgtctgcgac aacggcaacgtgttgtgcgatgacgtaatctgcgacgaaaccaagaactgtcccggcgct cacgtgcccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctaccggc caggaaaccaccggagccgagggacccaaaggagacactggcccccgaggcccaagggga cctgccggcccccctggccgcgacggcatccctggacagcctggacttcctggacccccc ggccctcccggcccccccggaccccctggcctcggaggaaactttgctccccagatgtct tacggctatgatgagaagtcagctggaggaatctctgtgcctggccccatgggtccttct ggtcctcgtggtctccctggtccccctggcgcacctggtccccaaggtttccaaggcccc cctggtgagcctggcgagcctggagcctcaggtcccatgggtccccgtggtccccctggc cctcctggcaagaacggagatgatggtgaagccggaaagcctggtcgtcccggtgagcgt gggccccctggacctcagggtgctcggggattgcccggaacagctggccttcctggaatg aagggacacagaggtttcagtggtttggacggtgccaagggtgatgctggtcccgctggt cccaagggtgagcctggtagccctggtgaaaatggagctcctggtcagatgggcccccgt ggtctgcctggcgagagaggccgccctggagcccccggccctgctggtgctcgtggaaat gatggcgctactggtgctgctggcccccctggtcccactggccccgctggtcctcctggc ttccccggtgctgttggtgctaagggcgaagctggtccccaaggagcccgcggctctgaa ggtccccagggtgtgcgtggtgagcccggcccccctggcccagctggtgctgccggccct gctggaaaccccggcgctgatggacagcctggtgctaaaggcgccaacggcgcccctggt attgctggtgctcccggcttccccggtgcccgaggcccctctggaccccagggccccagc ggccctcccggtcccaagggtaacagtggcgaacccggtgctcccggcaacaaaggagac actggcgccaagggagagcccggccccactggtattcaaggcccccctggccctgctggg gaagaaggaaagcgaggagcccgaggtgaacccggacccactggcctgcccggaccccct ggcgagcgtggcggacctggcagccgcggtttccctggtgcagatggtgttgctggtccc aagggtcctgctggcgaacgtggttctcctggccctgctggccccaaaggctctcctggt gaagctggtcgccccggtgaggctggtctgcccggtgccaagggtctgaccggaagtcct ggcagccccggtccagacggcaagactggcccccctggtcccgctggtcaagatggtcgc cccgggcctccaggtccccctggtgcccgtggtcaggctggcgtgatgggattccctggg cctaaaggtgctgctggagagcctggcaaggcgggagagcgcggtgtccccgggccccct ggcgctgttggtcctgctggcaaagacggagaagccggagctcagggaccccccggccct gccggccccgctggtgagagaggcgaacaaggccctgctgggtcccccggattccagggt cttcctggccccgctggacctcctggtgaagcaggcaaacctggcgagcagggtgttcct ggagatcttggtgcccctggcccctctggagcaagaggcgagcgaggtttccctggtgaa cgcggcgtgcaaggtccccctggtcccgcaggtcctcggggagccaatggtgcccctggc aatgacggtgctaagggtgatgctggtgcccctggagcccccggcagccagggcgctcct ggccttcagggaatgcctggtgaacgaggcgcagccggtcttccaggccctaagggtgac agaggcgatgctggtcccaaaggtgctgatggttctcctggcaaagatggcgtccgtggt ctgactggccccatcggtccccctggccccgctggcgcccctggtgacaagggtgaagct ggtcccagcggccccgctggtcccacaggagcccgcggcgcccccggagaccgtggtgag cctggtccccccggccctgctggcttcgctggtccccctggtgctgatggccaacctggt gctaaaggcgaacccggtgatgctggtgctaaaggcgatgccggcccccctggccccgct ggccccactggcccccccggccccatcggtaatgttggtgctcctggacccaaaggtgct cgaggcagcgctggtccccctggtgctactggattccctggtgctgctggccgagtcggt cctcccggcccctctggaaacgctggaccccctggccctcccggccctgttggcaaagaa ggcggcaaaggcccccgcggtgagactggccccgccggccgtcccggtgaagtcggtccc cctggcccccctggccccgctggcgagaaaggatcccctggtgctgatggacctgccggt gctcccggcactcccggacctcaaggcattgctggacagcgtggtgtggtgggcctgccc ggtcagcgaggagaaagaggcttccccggtcttcccggcccctctggggaacctggcaaa caaggtccttctggcccgagcggtgaacgtggcccccctggtcccatgggcccccctgga ttggccggaccccctggcgagtctggacgtgagggatctcccggtgccgaaggctccccc ggacgagatggttctcctggccccaagggtgaccgcggtgagaccggcccttctggaccc cccggtgcccctggcgctcccggtgcccccggtcccgtcggccccgctggcaagaatggc gaccgtggtgagactggtcccgctggtcccgccggccccatcggccctgtcggcgctcgc ggtcccgccggaccccaaggcccccgtggtgacaagggtgaggcaggcgaacagggtgac agaggcataaagggtcatcgtggcttctctggtctccagggtccccctggccctcccggc tctcctggtgaacaaggtccttctggagcttctggtcccgctggtccccgaggtcccccc ggcgctgctggctctcctggcaaagacgggctcaacggtctcccaggccccatcggcccc cctggtcctcgtggtcgcactggtgacgctggccctgtcggtccccccggccctcctgga ccccccggtccccccggtcctcccagcggtggcttcgacttcagcttcctgccccagcca cctcaagagaaggctcacgatggcggccgctactaccgggccgatgacgccaacgtggtc cgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaac atccggagccccgaaggaagccgcaagaaccctgcccgcacctgccgtgacctcaagatg tgccactcagactggaagagcggagaatactggatcgatcccaaccaaggctgcaacctg gatgccatcaaggtcttctgcaacatggaaacaggagagacctgcgtgtaccccactcag ccccacgtggcccagaagaactggtacatcagcaagaaccccaaggacaagaggcacgtc tggtacggcgagagcatgaccgacggatcccagttcgagtatggcggccagggctccgat cctgccgatgtggccatccagttgaccttcctgcgcctgatgtccaccgaggcctcccag aacatcacctaccactgcaagaacagcgtggcctacatggaccagcagactggcaacctc aagaaggccctgctcctccagggctccaacgagatcgagatccgggccgagggcaacagc cgcttcacctacagcgtcacctacgacggctgcacgagtcacaccggaaactggggcaag acagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgatgtggcccca ttggacgttggcgccccagaccaggaatttggcttcgacgttggccctgcctgcttcctg taa

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