Hathewaya histolytica: NCTC503_02411
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Entry
NCTC503_02411 CDS
T05971
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC503_02411 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhw03021
]
NCTC503_02411 (rpoA)
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_02411 (rpoA)
Enzymes [BR:
hhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC503_02411 (rpoA)
Transcription machinery [BR:
hhw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC503_02411 (rpoA)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC503_02411 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF211
RAD51D_N
HHH_3
SAM_EPH
DUF7454
Motif
Other DBs
NCBI-ProteinID:
VTQ94942
UniProt:
A0A4U9RRM5
LinkDB
All DBs
Position
1:complement(2413732..2414679)
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AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVETSEDGSYGKFVIEPLERGYGITLGNSLRRILLSSLPGAAANCIKIDG
VLHEFSTVKGVKEDVAELILNIKELAIKMHGEGSTTVYIDAQGPGEVKAGDIKTGGNVEI
INKDLHIATLDSDSKLYMEINVNKGRGYVSQSKNKSDDLPIAVIPIDSIYTPVKRVNYIV
ENTRVGQITDYDKLTLEVWTNGTIKPEEAISLSAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERSMEDMMKVRNLGKKSLEEVQ
HKLKELNLGLKKSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaatagaaaagccaaaaattgagtgtgttgaaacaagtgaagatggttcatac
ggtaaatttgttattgaaccattagagagaggttatggtattactttaggtaattcctta
agaagaatacttctttcatcattaccaggagcagctgctaactgtattaaaatagatgga
gtattacatgaattctctactgtaaaaggtgttaaagaggatgttgcagaattaatactt
aacataaaagagttagctataaaaatgcacggagaaggatcaaccactgtgtatattgat
gcacaaggaccaggagaagttaaagctggagatattaaaactggtggcaatgtagaaatt
ataaataaagatttacatattgctacattagatagtgattcaaaactatatatggaaatc
aacgtaaataaagggagaggatatgtttctcaatctaaaaacaaatcagatgatcttcca
atagccgttattcctattgattccatatatacaccagttaaaagggttaattatatagtt
gaaaatactagagtaggtcagattactgattacgataaattaactttagaagtttggact
aacggaacaataaaacctgaagaagctataagtttatctgctaagattcttattgaacat
ttcaaactatttatgacattaacggatcatgctgatgatgttgagataatggttgaaaaa
gaagaagacaaaaaagaaaaggttcttgaaatgactattgaagaacttgatctttctgta
agaagttataattgcctaaaaagggcaggaattaacactgttcaggagttaactgaaaga
agcatggaagacatgatgaaagttagaaaccttggaaagaaatctttagaagaagttcaa
cataaattaaaagagttaaacttaggcttgaaaaaaagtgaagaataa
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