Haemophilus influenzae PittEE (nontypeable): CGSHiEE_07235
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Entry
CGSHiEE_07235 CDS
T00543
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGSHiEE_07235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hip03400
]
CGSHiEE_07235
Enzymes [BR:
hip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CGSHiEE_07235
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGSHiEE_07235
DNA repair and recombination proteins [BR:
hip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGSHiEE_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Tnp_IS1595
zinc-ribbons_6
HscB_4_cys
DZR
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ABQ98774
UniProt:
A5UDC3
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All DBs
Position
1437715..1438530
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AA seq
271 aa
AA seq
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MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELITLKNVKIVDLTRRAKYLI
IHTEKGYIIGHLGMSGSVRIVPQNSAIDKHDHIDIVMNNGKLLRYNDPRRFGAWLWTENL
DDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGVGNIYANESLFICG
IHPLKLAKNLTLNQCFSLVNTIKDVLRKAIIQGGTTLKDFLQPDGRPGYFAQELLVYGNK
DKPCPKCGGKIESLIIGQRNSFFCPKCQKRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagtcgaaactgcactacgtggtattagcccttatcttaagaat
tttacgattgagaaagttgtcgtgcgccagcctaaattgcgctgggctgtatcagaagaa
ttaataacccttaaaaatgtaaaaattgtcgatctcactcgtcgagcaaaatatttgatt
attcacacggaaaaaggctatatcatcgggcatttgggcatgtccggttcggtgcgaatt
gtgccacagaatagcgcaatagataaacatgatcatattgatattgtaatgaataatggc
aagttattacgctataacgatcctcgccgtttcggtgcttggttgtggacggagaatcta
gatgactttcatcttttcttaaagttaggccctgaaccactttctgatgaatttaatgcc
gaatatttattcaaaaaatctcgtcaaaaatctaccgcacttaaaactttcttgatggat
aacgctgtggttgttggtgttggaaatatttatgcgaatgaaagtttgtttatttgtggc
attcatccccttaaactcgctaaaaatttgactctcaatcaatgtttctctttagtgaac
acgattaaagatgttttgagaaaagccattattcaaggtggaacaacacttaaagatttt
ttacagcccgatggtcgcccaggttattttgcacaagaattattggtatatggcaataaa
gataaaccttgtccaaagtgcggtggaaaaattgaaagtttaattattggacagcgtaat
agtttcttttgcccgaaatgtcagaaaaggggttag
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