Heterobasidion irregulare: HETIRDRAFT_154493
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Entry
HETIRDRAFT_154493 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K02328
DNA polymerase delta subunit 2
Organism
hir
Heterobasidion irregulare
Pathway
hir03030
DNA replication
hir03410
Base excision repair
hir03420
Nucleotide excision repair
hir03430
Mismatch repair
hir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HETIRDRAFT_154493
03410 Base excision repair
HETIRDRAFT_154493
03420 Nucleotide excision repair
HETIRDRAFT_154493
03430 Mismatch repair
HETIRDRAFT_154493
03440 Homologous recombination
HETIRDRAFT_154493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_154493
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_154493
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
HETIRDRAFT_154493
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
HETIRDRAFT_154493
MMR (mismatch excision repair)
DNA polymerase delta complex
HETIRDRAFT_154493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_D_N
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
20667499
NCBI-ProteinID:
XP_009542399
JGI:
Hetan2_154493
UniProt:
W4KJQ1
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MCDNTTVSNSSVPSSPLARHPTTALPLSDKIPTFVINAANKTYKHQYANIYFARLRILRD
FVQNEAQKRWKDIAGSPKLVPRVLDVIKGQLCFVIGTVYLDMPLKPNVLEDIGRDRSIPA
PPPREKIYSPDDVVTLEDESGRIQLVGDRLKKAQLLTGVIVGALGLETSGGEFEVIDLCF
AEMPPQHEGERLEQDEMDIDEKSSAVSQSPEDFVAFVSGLDIGSHTPSDAQIQMLVEYLT
GESGGLGDQISASQITRLVVLGNSLAPIGATGTTDDGEKETEKRPRRYGYDSASFSPHPI
LHLSSHLHDLASSMPVHLLPGASDPSGTILPQQSFPRAMFGAASTYATFTCETNPTYIHL
ASRAQDSLEDLKKAGQPLPRSRLILATSGQPLNDMFKYLPSPPVTRLSIAESTLRWRHVA
PTAPDTLWCHPYFTTDPFILTETPDVYAIGCQPRFSTRLVKQNSQKCRIILVPGFAETGV
LVLVSLKTLDTRIVKFSVEGMNLGISSENQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacaatacgacagtgtctaatagttcggttccatcaagtcctctcgcccgccac
ccaacaacggcgctgcctctttccgacaaaatcccaaccttcgttataaatgcagccaac
aaaacatacaaacaccaatacgcgaacatttactttgcacgactacgcatattgagagat
tttgttcaaaatgaagcgcagaaacgctggaaagatattgctgggtctccaaagctcgtt
cctcgagtgctagatgtgatcaaaggacaactatgttttgtcattggaactgtgtaccta
gacatgccgctaaaaccaaatgttttggaagacatcgggagagatcgctccatccctgca
ccacctccaagagaaaaaatctactcaccagatgacgttgtcacacttgaggacgagtct
ggccgcattcagcttgtcggtgaccgattaaagaaggcgcaactgttgacaggggtgatt
gtaggagcattagggctggaaacaagtggcggtgaatttgaagtcatagatctgtgtttt
gctgagatgccccctcaacacgaaggtgaaaggttagagcaagatgagatggacatagac
gaaaaatcttcagcggtatcacagtccccggaggattttgtcgcatttgtgtctggtctg
gacataggctcacacactccatcggatgcacagatacagatgctcgtggaatatctcaca
ggagagagtggtgggctgggtgatcaaatttcagcctctcagattacgcggcttgttgtt
cttggtaactcactcgcaccaatcggagctacaggcacaacggatgacggagaaaaagaa
accgagaaaaggcctcgccgatacggatatgactctgcctctttctccccacacccaatc
ctccacctctcctcgcacctccatgaccttgcatcatcaatgcccgtccatcttcttcca
ggggcctccgacccctcaggcactatcctaccacaacaaagcttccctcgggctatgttc
ggagctgcatctacttatgccactttcacctgcgagacaaatcctacgtatatacacctt
gcttcgagggctcaagactctttggaagacttgaagaaagcaggacaacctcttccgcgc
agccgcctgattctggctacatctggacagccattaaacgacatgttcaaatacttaccg
agtccaccggtcacgcgattaagcattgcagaatcgaccttgcgatggcgacacgtcgct
ccgacggcaccagacacactctggtgtcatccatatttcaccacagatccgttcattctt
accgaaacgcccgacgtctacgccatcggttgccagccacgattttcgacgcgactcgtc
aaacagaactcacagaagtgtagaattattctcgtcccaggattcgcggagacaggagtg
ctggtgctggtaagcttgaagacgcttgatacgaggatcgtcaaattttctgttgagggc
atgaatcttggcatctcatcagagaaccaataa
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integrated database retrieval system
