Halobiforma lacisalsi: CHINAEXTREME10805
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Entry
CHINAEXTREME10805 CDS
T04669
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
hlc
Halobiforma lacisalsi
Pathway
hlc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHINAEXTREME10805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlc03021
]
CHINAEXTREME10805
Transcription machinery [BR:
hlc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CHINAEXTREME10805
Prokaryotic type
Archaeal type
TFB
CHINAEXTREME10805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
A2L_zn_ribbon
Trm112p
YjdM_Zn_Ribbon
Zn_Tnp_IS1595
Sigma70_r4
Cyclin_C
Cyclin_N
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
APW98249
UniProt:
M0L8I2
LinkDB
All DBs
Position
complement(2249931..2250893)
Genome browser
AA seq
320 aa
AA seq
DB search
MTRSTRQRERTRETDETEDQEEVRACPECDSDNLVKDSDRGELICEDCGLVVEEEKIDPG
PEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVA
TSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPRFCS
ELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIHG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccacccgccagcgggagcgaacgcgtgagacggacgagaccgaggatcaa
gaggaggtacgggcttgtccggagtgtgactcggacaatctcgtgaaagactccgatcgg
ggggagctcatctgtgaagactgtgggctcgtcgtcgaggaggagaagatcgatcccggc
ccggagtggcgagcgtttaaccaccaggaacgtcaggagaagtcccgcgtcggcgcgccc
acgacgcagacgatgcacgacaaggggctgacgacgacgatcgactggaaggacaaagac
gcctacggccgctctatttcctcgaaaaagcgcagtcagatgcaccggctgcgcaagtgg
caggaacgcatccggaccaaagacgccggcgaacggaatctccagttcgccctgagcgag
atcgaccggatggcctccgcactcggtgtcccgcgatcggtgcgcgaggtagcctcggtc
atctaccggcgtgcgctcaaggaggacctcatccgtggtcgttcgatcgagggggtcgcg
acctcggcgctgtacgctgcctgccgcaaggaaggcatcccgcgaagcctcgaagaaatc
tcggaagtctcacgcgtcgaacgcaaggagatcggtcgcacgtatcgctacatctcgcag
gaactcggcctcgagatgcgtcccgtcgacccgaaaaagtacgtcccacgcttctgttcc
gaactcgaactgtccgaagaggtccagaccaaggccaacgagatcatcgagaagacggcc
gaggagggcctgctgtcgggcaagtcgccgaccggatacgccgccgccgcgatctacgcc
gcctcgctgctgtgtaacgagaagaagacccagcgcgaagtcgcagacgtcgcgcaggta
accgaagtgacgatccggaaccggtaccaagaacagatcgaagcgatggggatccacggc
taa
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integrated database retrieval system
