KEGG   Haliaeetus leucocephalus (bald eagle): 104829206
Entry
104829206         CDS       T08630                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Pathway
hle03030  DNA replication
hle03410  Base excision repair
hle03420  Nucleotide excision repair
hle03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104829206 (RFC5)
   03410 Base excision repair
    104829206 (RFC5)
   03420 Nucleotide excision repair
    104829206 (RFC5)
   03430 Mismatch repair
    104829206 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hle03032]
    104829206 (RFC5)
   03036 Chromosome and associated proteins [BR:hle03036]
    104829206 (RFC5)
   03400 DNA repair and recombination proteins [BR:hle03400]
    104829206 (RFC5)
DNA replication proteins [BR:hle03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104829206 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104829206 (RFC5)
Chromosome and associated proteins [BR:hle03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104829206 (RFC5)
DNA repair and recombination proteins [BR:hle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104829206 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104829206 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA_24 AAA_16 AAA_11 AAA_assoc_2 AAA_lid_RFC1 AAA_14 DEAD nSTAND_NTPase5 RuvB_N DUF815 ResIII AAA_5 AAA_30 AAA_19 PhoH AAA_7 TniB ATPase_2 DNAX_ATPase_lid nSTAND3 TIP49 Thioredoxin_6 Mg_chelatase IstB_IS21 bpMoxR Hydantoinase_B NPHP3_N AAA_28
Other DBs
NCBI-GeneID: 104829206
NCBI-ProteinID: XP_010561620
LinkDB
Position
Unknown
AA seq 329 aa
MARAGGGNLPWVEKYRPQTLSELVSHGDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACAKQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLRHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTTMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKTLKGLALQDILTEIHLFVHRVDFPPSIRIQLLIKMADIEYR
LAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcgcgggccggtggcgggaatctgccgtgggtggagaagtaccggccgcagacgctg
tccgagctggtgtctcacggggatatcctcagcaccgtgcagcggttcatcagcgaggat
cggctcccgcatcttctcctctacggtcctcccggtaccgggaagacctcgaccatcctc
gcctgcgccaagcagctctaccgggagcgggagtttggttccatggtgctggagctcaac
gcctctgatgaccgggggatcgacatcgtccgagggcccatcctgagcttcgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagccgacgccatgacc
caggatgctcagaacgccctgaggcgagtgatcgagaagttcaccgaaaacacccgcttt
tgcctcatctgcaactacctctccaagatcatccccgccctgcagtcccgctgcacgcgc
ttccgcttcggccccctcaccccggagctgatggtcccccggctgcggcacgtcatacag
gaggagggggtggacgtgaccgaggatgggatgaaggctctggtgaccctctccagcggt
gacatgcgcagagccctcaatatcttgcagagcaccaccatggccttcgggaaagtgaca
gaggagaatgtctacacctgcacgggacaccccctcaaatctgatatcgccaacatcctc
gactggatgctgaaccaggacttttccaccgcctatcgcaaaatcacggagctgaagacg
ctgaagggcttggccctgcaggacatcctcaccgagatccatctctttgtgcacagagtt
gacttcccaccctcgatccgcatccagctgctgatcaaaatggcagacatcgagtaccgg
ctggctgctgggaccagtgaaaagattcagctgagctccctcatcgcggctttccaagtc
accagggacctgatcgtggccgaagcctga

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