Haliaeetus leucocephalus (bald eagle): 104838538
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Entry
104838538 CDS
T08630
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104838538 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hle03400
]
104838538 (LIG4)
Enzymes [BR:
hle01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104838538 (LIG4)
DNA repair and recombination proteins [BR:
hle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104838538 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
SKA1
Tox-REase-9
DUF2948
Motif
Other DBs
NCBI-GeneID:
104838538
NCBI-ProteinID:
XP_010576625
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASTHASQPSKKTVAAQVPFADLCATLERMQTCKPRPEKTKYFKDFLDSWRKFHGALHQK
EKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPA
GSRGDTGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTILSIFHPDALELHNVTTDLEKVCRQLHDPNVSLS
DVSITLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTAVTGRIHVVQKKSARTRKEVID
ALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNERPTIFRSFCRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPS
NILCGTEKPEMYIEPCNSVIVQIRAAEIVNSDVYKTDCTLRFPRIEKIREDKEWYECMTS
DMLEDLRSKAEGKLASKHLHMDAYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSGVNKVS
NVFEDVEFCVMTGTGKYSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKKLVPWQPAFMIHMSPDTKEHFACEYDCYGDSYTADTDVAQLKE
VFSRMKDTKVMPLDMITELEEHYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIHGTTLSV
RALELRFYGAKVVSHLEEGVSHVVIGEDRSRVQEMKALRRTFGKKFKIVSELWVTQSVEG
GVLKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacgcacgcttcgcagccttcaaaaaaaacggtggccgctcaagtgcctttt
gcggatctgtgtgctactctggagcgaatgcagacgtgtaagcctcgtccggagaaaacc
aagtatttcaaggattttctggactcctggagaaaattccacggtgctcttcatcagaag
gagaaggacgtcacagattctttttatccagctatgcgacttattcttccgcagttggaa
agagaaaggatggcatacggaattaaagaaactatgcttgcgaagctgtatattgaactg
cttaatttaccaaaagatggaaaagatgctgcaaagctgttaaactataggacacctgct
ggctcacgtggagatactggagattttgcaatgatcgcatactttgtgttaaaacctagg
agcccgaaacaaggcagactgacaatagaacaagtcaatgaacacttggatgcgatagct
aataataatgctgctaaaaacaagggtctgttaaagaaaagtcttcttcagttaattacc
cagagcacagcactggaacagaaatggctcatccgcatgattataaaggatctgaagctt
ggagttagtcaacaaactatactttccatttttcatcctgacgctcttgaattacacaat
gtcacaactgatttggaaaaagtttgcagacaactgcatgatcccaacgtctcacttagt
gatgtttctatcacattgttttctgcctttaaaccaatgcttgctgctattgctgatgtc
cagcaaatcgagaaacaaatgaataaccagatattctacatagaaactaagctggatggt
gagcgtatgcagatgcacaaagatggagatgtgtataaatatttttcccgaaatgggttt
gactatactcagcagttcggcgcttccccccttgatggttcattaacaccatttattcat
aatgtatttaagagcaatatacaaaattgcattctcgatggtgaaatgatggcttacaat
cctgagacacaaacctttatgcaaaaaggaaacagattcgacataaaaagaatggtggag
gactctgatctgcagacctgcttctgtgtgttcgatgtattgatggttaatgatcagaag
ttggggcacgaagtactaagcaaaagatatgaaatcttaagtagcgtatttactgcggta
acgggcaggatacatgttgtacagaaaaaaagtgccagaacaagaaaagaagtaattgat
gctttaaatgaagcaatagataacagagaggaagggattatggtgaaagatcccatgtcc
acctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtcaat
ggactgatggatgaactagaccttttaattgttggtggttactgggggaagggctcacgt
ggtggaatgatgtctcattttctgtgcgctattgcagagacgccccctccaaatgaaaga
cctaccattttccgctctttttgtcgtgttggctctggctatactatgaaggaattgtat
gatttaggtttgaaactggctaaacactggaagccctaccataggaaggaccctccctct
aacatcttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtcatc
gttcagatcagggcagctgagattgttaacagtgatgtgtacaaaactgactgtactttg
agattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgacttca
gacatgttagaagatctcagaagcaaagcagaagggaagctggcatctaagcaccttcat
atggatgcatatgatgagccacaagagaaaaaaaggaaaactgtatcaaaggtgaagaag
gtgattggaatagctgagcaatttaaagctcctgatctttctggtgtaaacaaggtttca
aatgtatttgaagatgttgagttttgtgttatgacgggaacaggcaagtactcaaagtct
gaactggaaagcagaatagccgaatgtggtggcagtgtggtacagaacccggggccagag
acttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcttccaac
aaatacgacgtggtgagggcagagtggctccttcagtgttttcaaaccaaaaagctggtg
ccttggcaaccggcctttatgattcacatgtctcctgacacaaaagaacattttgcttgt
gagtatgattgttatggagacagctacacagcagacacagatgttgcacaactcaaggaa
gtgttctcaagaatgaaagacactaaggtgatgcctttggacatgattacagagttagaa
gagcattattcgtggaacagctgtcagctcagtatattcagaggaaacactatttatgtg
gactgttatgctgttgttaatgagcccagaaccaaaatccatggaacaacactatcagtt
agggctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggtgtc
tcccatgttgttataggagaagatcgttcccgggtacaagagatgaaagcactcagaaga
acatttgggaaaaaatttaaaattgtatctgaactgtgggtaacacagtcagtggaggga
ggagtcctgaagaatgaaaatcagtacttaatttaa
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integrated database retrieval system
