Haloferax volcanii SVX82: SVXHx_0118
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Entry
SVXHx_0118 CDS
T08885
Symbol
ffh
Name
(GenBank) Signal recognition particle GTPase
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hln
Haloferax volcanii SVX82
Pathway
hln02024
Quorum sensing
hln03060
Protein export
hln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SVXHx_0118 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SVXHx_0118 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SVXHx_0118 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hln02044
]
SVXHx_0118 (ffh)
Enzymes [BR:
hln01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SVXHx_0118 (ffh)
Secretion system [BR:
hln02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SVXHx_0118 (ffh)
Eukaryotic Sec-SRP protein
SVXHx_0118 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
ArsA_ATPase
Zeta_toxin
cobW
AAA_18
APS_kinase
ResIII
SMC_N
AAA_24
AAA_33
PRK
KTI12
Motif
Other DBs
NCBI-ProteinID:
WEL24453
LinkDB
All DBs
Position
113830..115227
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AA seq
465 aa
AA seq
DB search
MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA
LEEEPPGGTSARDHVLKIVYEELVDLIGESTEIPLESQTIMLAGLQGSGKTTTSAKMAWW
FSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEATEDADV
HIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESIGIGGVV
ITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDLKQLSER
VERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMDKMGPLDQVLDMIPGFGGGIKDQ
LPDDAMDVTKDRMRSFEVIMDSMTEEELENPRKVGASRVRRIAQGSGQDEETIQELLEQH
RMMEQTIKQFQNMGDGDMQRMMKKLQNQGGGGGGGMGGLGGMGPF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgacaatctcgggagttccctccgcggcagtctcgataagctgcgcgggaag
tcccgcctcgacgaggacgacgttcaggagatcgtcaaggagattcagcgctccctgctc
tccgccgacgtcgacgtcagcctcgtcatggacctctcggactctatcaagacccgcgcg
ctggaagaggagccgccgggcggcacgagcgcgcgcgaccacgtcctgaaaatcgtctac
gaggaactcgtcgacctcatcggcgagtcgacggagattccgctcgaatcgcagaccatc
atgctcgccggcctccaggggtcggggaagacgaccacctccgccaagatggcgtggtgg
ttctcgaagaaggggcttcgccccgcggtcatccagaccgacaccttccgccccggcgcg
tacgaccaggccaagcagatgtgcgagcgcgccgaggtcgacttctacggcgaccccgac
tgcgacgacccggtccaaatcgcccgcgagggcctcgaagcgaccgaggatgccgacgtg
cacatcgtcgacacggccggtcgccacgcgctcgaagacgacctcatcgacgaaatcgag
gagatagagggcgtcgttcagcccgacctgaacctgctcgtcctcgacgcggcaatcggg
caaggggcgaaggaacaggcccagcagttcgacgagtccatcggcatcggcggcgtcgtc
atcaccaaactcgacgggacggcgaagggcggcggcgcgctgaccgccgtcaacgagacc
gactcgtctatcgccttcctcggcatgggcgagacggtccaggacatcgagcgcttcgag
ccgaacggcttcatctctcggctgctcggcatgggcgacctgaaacagctctccgagcgc
gtcgaacgcgccatgtccgagacccaggccgaagacgaggactgggaccccgaggagatg
atgaaggggaacttcaccctcaaggacatgcaaaaacagatggaggcgatggacaagatg
gggccgctcgaccaggtgctcgacatgattccgggcttcggcggcggcatcaaagaccag
cttccggacgacgcgatggacgtgaccaaagaccggatgcgctcgttcgaggtcatcatg
gactcgatgaccgaggaggaactggagaacccccggaaggtcggcgcgtcccgcgtcagg
cgcatcgcgcaggggtcgggacaggacgaggagacgattcaggaactgctcgaacagcac
cgcatgatggaacagaccatcaagcagttccagaacatgggcgacggcgacatgcagcgg
atgatgaagaagctccagaatcagggtggcggcggcggtggcggcatgggcggtctcggc
ggcatggggccgttctga
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