Haloferax volcanii SVX82: SVXHx_3209
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Entry
SVXHx_3209 CDS
T08885
Symbol
eRF1
Name
(GenBank) Peptide chain release factor eRF1
KO
K03265
peptide chain release factor subunit 1
Organism
hln
Haloferax volcanii SVX82
Pathway
hln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SVXHx_3209 (eRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hln03019
]
SVXHx_3209 (eRF1)
03012 Translation factors [BR:
hln03012
]
SVXHx_3209 (eRF1)
Messenger RNA biogenesis [BR:
hln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
SVXHx_3209 (eRF1)
Translation factors [BR:
hln03012
]
Eukaryotic type
Release factors
SVXHx_3209 (eRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
acVLRF1
eRF1_3
baeRF_family10
eRF1_1
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
WEL27417
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All DBs
Position
pSVX82-1:226866..227942
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AA seq
358 aa
AA seq
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MQTTEYELRDRIDQLTNYRGEGTELITVAVPPDKSLHAVRERIDREYAQAANIKSDQTRT
HVQDALGRIRRLLQAYEETPPSGLVIYAGVVDGELQDAVFDDLDVPVDVSLYRCAAEFEI
APVEQALTPSEVYGLVVLERGRAALGRLAGERIVSSRTFESQVMGKSRAGGQSAQRFERE
RDRQKHEFFEQVADAAEQTFLDEPTVDGVILGGTTITVDEFQQGDYLHHELRDHILGVYP
IEYATKQGLSQFVERAEDVLSDAERRRERESLDRFFTVLGQGGDVAYGADETQTALDYGA
VDVLLVSDARPPAEIRELEEATTDQGGECLVVSTDTDRGAQFDTAFGGLGALLRFPIN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaccgagtacgaactccgcgatcgaatcgaccagctcacaaactaccgtggc
gagggcaccgaactcatcaccgtggccgtcccgccagacaaatcactccatgcggtccgt
gagcgcattgaccgcgaatatgcacaggctgcgaacatcaaatccgatcagacacgaacg
cacgtccaggacgcgctcggacgcatccggcgcctcctccaagcgtacgaagagacacca
ccaagcggcctcgtcatctacgcaggtgtcgtcgacggtgagctgcaggacgccgtcttc
gacgatctcgacgtccccgtcgacgtctcactgtaccgctgtgcggctgaattcgagata
gcccccgtcgagcaggcgctcaccccgtcagaggtgtacggtctggtcgtcctcgaacgg
ggccgtgccgccctcggtcgcctcgccggcgaacgcatcgtttccagccggaccttcgag
agccaagtgatgggaaaatcccgtgctggcggtcagagtgcgcagcgattcgaacgcgag
cgagaccgacagaaacacgagttcttcgagcaggtcgccgacgctgccgagcagacgttc
ctcgatgagcccactgtcgatggcgtcatcctcggcgggacgacaatcaccgtcgacgag
ttccagcagggtgactatctccaccacgagttgcgggaccacatactaggcgtctatccg
attgagtacgcaaccaagcagggtctctcgcagttcgttgagcgtgccgaggacgtactg
tctgatgctgagcgccgacgggagcgggaatccctcgatcggttcttcacggtgttggga
cagggtggagatgtcgcctacggagctgatgaaacgcaaaccgccctcgactatggagca
gtcgacgtcctcctcgtttccgacgcacggccaccagcagagattcgtgagctggaggaa
gcgacgaccgaccaaggcggtgagtgtctcgttgtgtcgactgacaccgatcgaggtgcc
cagttcgatactgcattcggaggccttggagcgctcctccggtttccgatcaactaa
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