KEGG   Humulus lupulus (common hop): 133788770
Entry
133788770         CDS       T11341                                 
Name
(RefSeq) uncharacterized protein LOC133788770
  KO
K12828  splicing factor 3B subunit 1
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133788770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hlp03041]
    133788770
   03036 Chromosome and associated proteins [BR:hlp03036]
    133788770
Spliceosome [BR:hlp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133788770
 Complex B
    133788770
 Complex C
   U2 SnRNP specific factors
    133788770
Chromosome and associated proteins [BR:hlp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    133788770
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_MROH2B_C HEAT TPR_DNAAF5 HEAT_ECM29 TPR_IPO5 HEAT_EF3_N Htt_N-HEAT_1 Cnd1 HEAT_2 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 133788770
NCBI-ProteinID: XP_062082352
LinkDB
Position
7:complement(163794863..163799188)
AA seq 1265 aa
MASTDPEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDRDAYVSSIPVTDDDENNDPMD
NEVVRKLASYTAPKSLINDVPRGGDDDAGLGPKKPNSIMEREDSYRRRRLNQVISPDRND
PFASGEMTPDPSVRTYADVMKEAALKRKEQETLRLIAEKKKDQEEAAKAAAEKGETTTVA
AAPQKRRNRWDLSQDDGAAKKAKTSDWDLPDTTPGRWDSTPTPGRLGDATPGVGRRNRWD
ETPTPGRLVDSDATPAGAVTPGATPSGMAWDSTPKLAGLATPTPKRQRSRWDETPATMGS
ATPGATPAAAYTPGVTPAGGAELATPTPGAINLRGSITPEQYNLLRWEKDIEERNRPLTD
EELDSMFPQEGYKILDPPASYVPIRTPARKLLATPTPMATPLYAIPEENRGQQFDVPKES
AGGLPFMKPEDYQYFGALLNEDDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLT
DKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEP
LLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALG
IPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQK
VRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAI
YASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFKNFWV
RRMALDRRNYRQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLG
ASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWR
LNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKA
IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRIC
FELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIV
AETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMD
RDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRV
ALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLDDEQNNIYSRPE
LVMFL
NT seq 3798 nt   +upstreamnt  +downstreamnt
atggcgtccacagacccggagatagcgaagactcaggaagaacgcaggaagatggagcag
cagcttgcttcgcttaactctgtcactttcgataccgatctctatggtggaaacgatagg
gatgcttatgtctcttccattcctgttaccgacgatgatgagaacaacgaccctatggac
aatgaggttgtgcgcaagttagcctcttacactgctcctaagtcgctcatcaatgatgtc
cccaggggaggtgatgatgatgccggtttggggcctaagaagccgaactcgattatggaa
cgagaggattcataccgtaggaggaggctgaaccaggtgatttcgcctgatcgaaatgac
ccctttgcctcaggggagatgacgccggacccctcggtgaggacctatgctgatgtcatg
aaggaagcagccttaaaaaggaaggagcaggagactctaaggctcattgcggagaagaag
aaggatcaagaagaggccgctaaggcagcggctgagaagggagagaccaccactgtggct
gctgcgccccagaagaggagaaataggtgggacctgtctcaggatgatggtgctgcaaag
aaggccaagacttccgattgggatttgcctgatacgacaccaggtcggtgggactcaact
ccaactccaggaagactgggggatgcaactcctggtgttgggaggagaaatcggtgggat
gaaactcccacgcctgggcggttggtggattcagatgcgacccctgcaggtgccgtcacc
cctggtgctacaccttctgggatggcctgggattcaacccctaagcttgcagggctagcc
acgccgactcccaagaggcagaggtctagatgggatgagacaccagcaacaatgggtagt
gcgacacctggagccacaccagcagctgcttatacacctggtgtgactcctgccggagga
gctgaacttgctaccccaacgccaggggctattaatttgcgggggtcaattactccagag
cagtataacttgttgaggtgggagaaagatatagaggaaaggaaccgccccttaactgat
gaagagcttgattctatgtttccacaagagggatataagattttggaccccccagcttcg
tatgtacctattaggacaccagcgagaaagcttcttgctaccccaactccgatggcaact
cctctttatgccatcccagaagagaatcgtgggcagcagtttgatgttccaaaggaatct
gcaggtggcttgccatttatgaagccagaggattaccagtattttggtgcattgttgaat
gaggacgatgaggaagaattgtctcctgacgaacagaaagagcgtaaaattatgaagctt
ctactcaaggttaagaatggtacgcctccacagaggaagactgcgttgagacagcttact
gataaagctcgagagtttggtgctggtccattgtttaaccgcattctgccattgcttatg
caacccactttggaagaccaagagaggcatcttttggtcaaggttattgatagagtgctc
tataaattggatgaattggtgagaccctatgtgcacaaaattcttgttgtcattgagcct
ttgttgattgatgaagactactatgctcgtgtggaagggagagagattatctccaatctt
agtaaagcagctggattggctactatgattgctgccatgcgtccagatattgacaacatt
gatgaatatgttagaaatacaactgctagagctttcagtgttgttgcttctgctcttggt
attcctgccctattgccattcttgaaagctgtttgtcagagtaagaaatcatggcaagct
cgacatactggaattaagattgttcagcagattgccatcttgattgggtgtgctgttctt
ccacatttgaggtctcttgttgaaattatagagcacggtctcaatgatgagaatcaaaaa
gtgaggactattactgcattgtcacttgctgcacttgctgaggctgctgctccgtatggt
attgagagctttgattctgttctgaagcccttgtggaagggtattagatcacatcgtggt
aaggtcttggctgcgtttttgaaggccatcggttttattattcctttgatggatgccata
tatgccagttactataccaaggaagtgatggtaatattgattcgagagttccagtcacct
gatgaagaaatgaagaaaattgtgctgaaagtggtgaagcagtgtgtgagtacagagggt
gttgaggctgattatatcagaaatgatattcttccggagttctttaaaaacttttgggtt
aggaggatggcattggataggagaaattataggcaactagtggaaacaactgtagagatg
gcaaacaaagttggtgttgctgatatagtcggacgaattgttgaggatttaaaagatgag
agtgaaccatataggcgaatggttatggagacaattgaaaaggtagttgcaaatctgggt
gcatctgatattgatgctcggttggaggagcttttaattgatggaattctttatgctttc
caagagcagaccagtgatgatgccaatgtgatgcttaatgggtttggagcagtggttaat
tctcttggacagagagtcaaaccctatttgccgcagatttgtggtactatcaagtggcgt
ttgaataacaagagtgcaaaggtgaggcagcaagctgcggatcttatttcaaggattgct
gttgtcatgaagcagtgccaagaggaacaacttatgggccatcttggtgttgtactgtac
gagtacttgggagaagaataccctgaagttcttggatcaatcttgggagcattgaaagca
attgtcaatgttattggtatgacaaagatgacacctcctattaaagacttgcttcctaga
ttgactccaattttgaagaacaggcacgagaaagtccaagagaactgtattgaccttgta
ggtcgaattgctgaccgtggtgcagagtttgtcccagctagggagtggatgaggatttgt
ttcgaacttcttgagatgttaaaggctcacaaaaagggtatccggcgggctactgtgaac
acatttggctacattgcaaaagccatcggtccacaagatgtcctggcaactttattgaac
aacctgaaggtacaggaacgtcaaaaccgtgtatgcaccaccgtagccattgccatagtt
gcggaaacttgttctcctttcacagttttgccagctctgatgaacgagtatcgtgttcct
gagctgaacgttcagaatggtgttctgaaatcgctctctttcctgtttgagtacattggc
gaaatgggaaaagactacatatacgctgtgactccactgctggaggatgctctcatggac
agagatttggttcaccggcaaacagcagcttcagctgtcaaacacatggctttgggggtg
gctggattgggttgcgaggatgcattggtccacttgctgaattatgtgtggccaaacata
ttcgaaacctcacctcatgtcataaatgccgtcatggaagccattgaaggtatgagggtg
gccttgggagctgccgttgtgctaaactactgtctccagggtctttttcatcctgctcga
aaggtcagagaagtttactggaagatttataactcgttgtatattggagctcaagatgcc
cttgtggcagcttatccagtgctggacgatgagcagaataacatatatagtaggcctgag
ttggtgatgtttctgtga

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