Humulus lupulus (common hop): 133797493
Help
Entry
133797493 CDS
T11341
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133797493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133797493
DNA repair and recombination proteins [BR:
hlp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
133797493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
PFOR_II
Motif
Other DBs
NCBI-GeneID:
133797493
NCBI-ProteinID:
XP_062091394
LinkDB
All DBs
Position
8:62195046..62197844
Genome browser
AA seq
662 aa
AA seq
DB search
MARKKTSCVVMEEEREDAGREGKVRALIQRAINSTEPEVDPRLLKAIKLVVRYSESELRL
AAHTLLDLMKRDHAQVRYLTLLIIDQLFMRSKLFRELLVERMDILLTLSIGFRGNQPLPA
PPAVASLLRSKAIEFLEKWNESFGIHYRQIRLGFDYLKNTLRFQFPNLQANAARIQQEKR
ERERRSKEIVFNKYETLKGNFSSMEDEIQTTINEIGECLDIVRSGEKPPVALDSVDEEDF
FEFHSIEMRQLRITALEEGEKVHESTDNKVVFDALRELYKLVVTKHLVSVREGISVLVRV
ELTDNKLRDLILKDLINIQNRLLSVKKKCEEAGCSLLNTENNNEEEDFWEEGKTECTESG
SSITHQNGHKSVAVASASTKVENGGPSCSVKDPGKKKMSGESRRNKSNSLKNKLLADAPV
VQWGSQLDNWSSQRDVLANQRGLELEGHWGRVDYDAVIPAEKIAELNVQATVYSEDPVEI
QPCRAPLSKGGLCQRRDLKVCPFHGPIVPRDNEGKPLDQDSFKNDEAISDSGTDLAERIA
RQAVKNVRERDKEAAMMRVTDKRALKRAKLAKVREHNEACLKDAAMASTSYSASIGEDME
ATIAQNQSSRKMQTLASMLQKKVTPKDRLAQRLLNARTRGATVSQLTSAEDVKYRESFPN
QW
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagaaaaccagttgtgttgtaatggaagaggagagagaagacgccggaaga
gaagggaaggtcagggctctcatacaaagggcgatcaactcaaccgaaccagaagtcgat
ccacgcctcctcaaggccatcaaattggtggtccgctactctgaatcggaactccgactc
gccgcccataccctattggacctcatgaaacgcgaccatgcacaggttcggtaccttacc
cttctcataattgaccaacttttcatgcggtccaagctcttcagggagctccttgttgag
cgtatggacatcctcttgactctgagcatcggatttcgagggaatcagcctcttcctgct
ccaccagctgttgcaagccttctgcgttccaaggcaattgaatttctggagaagtggaac
gaatcatttgggattcattatagacagattagattggggtttgattacctgaagaatact
ctcaggtttcagttccctaatctgcaagcaaatgcagctcggattcagcaggagaaaaga
gagagggagagaaggtcgaaagagattgtgtttaacaagtatgagactttgaaagggaat
ttctcatccatggaggatgaaatacagactacaattaatgagattggagagtgtttggac
attgttcgtagtggagagaaaccccctgtggcattggattcagttgacgaggaggacttt
ttcgagttccattccattgaaatgaggcagttacgtatcaccgcattggaagaaggggaa
aaggttcatgagagcacagataataaagtggtttttgatgctttgagggagctatacaag
cttgtagtgacaaagcatttagtttcagttcgagaagggatctctgtacttgtgcgggtt
gaattgacggataacaaattaagagatttgattttaaaggatctcattaatatccaaaat
cgtcttctatcagtgaagaagaagtgtgaagaagcaggttgttctcttttaaatactgaa
aataataatgaagaagaagatttttgggaggaggggaaaactgaatgtactgagagtgga
agttctattacacaccaaaatggacataaaagtgttgccgttgcatcagcatccactaag
gtggaaaatggtggtccttcatgcagtgttaaagacccaggtaagaagaaaatgtctggt
gaaagtcgtagaaataaatcaaactctctgaagaataagcttttggctgatgctccggtt
gttcaatggggctcccagttggacaattggagttcacaaagggatgtattagccaaccag
aggggactggagcttgaaggtcattggggtagagtggactatgatgcagtcattccagca
gagaaaattgcggaattaaatgttcaggctacagtatatagtgaagatccagttgaaatt
caaccatgtcgtgcccctttgagcaaaggtggactttgccagagaagagatttgaaagtt
tgcccatttcatgggcctatcgttccccgagataatgagggaaaaccacttgatcaggat
tccttcaaaaatgatgaggcaatttctgattcaggtactgacttagcagaacgcatagca
agacaagctgtgaagaatgtacgtgagagagataaagaggcagcaatgatgagagtaact
gataaacgggcgttgaagcgtgctaaacttgcaaaagtaagggagcacaatgaggcttgt
ttaaaggatgcagcgatggcttcaacttcatattctgcatctattggagaagacatggag
gcaactattgcacagaatcagtcttctagaaagatgcagacacttgcttcgatgctccag
aagaaagttactccaaaagataggttagctcaaaggctattaaacgcacggactaggggt
gcaactgtatcacaacttacgtcggctgaggatgtaaaatacagagaatccttcccaaat
cagtggtaa
DBGET
integrated database retrieval system
