Hyphomicrobium sp. MC1: HYPMC_3994
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Entry
HYPMC_3994 CDS
T01557
Name
(GenBank) putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS sensor; putative membrane-associated protein precursor (modular protein)
Organism
hmc
Hyphomicrobium sp. MC1
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
HAMP
PAS_4
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
CCB67203
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Position
complement(3838856..3841354)
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AA seq
832 aa
AA seq
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MKVPIVFRFGIAAKAAVLIVSLGALSALANFFVLEGAQSLDRVNRAMIERVGPARLALSD
AKAALNDVGLAVYKSMSASDLDDARMASREAINQIAAARRWISAVADYFPARGADCDVIQ
SKLLYLEGTVRSLRDAILSSDKQRRADEMLDLRFDAALDDALGQMNRLTNLLGAESREVL
AQAETEQNSMSEVIVAILAIGTSLIVILALALVHYSQARPLRHLSEAALRVREGGAMSLD
LDENVLGRSDEIGTLARSFQSMLTKLAEAQESLAVQYARVDAAINNLPQGLCMFDAEQNL
IICNRRYAELYGLKPELTVAGTPLRSILRERRKNGRFSKFQEMALVDHIESATGRDPIYR
IEELTDGQVIAISHQPMRDGGSIAIHEDITERRKMDAKIAHMAHHDALTDLPNRVRFHEA
MEMALKGAEHDHTVSILCLDLDNFKTVNDTLGHPVGDALLQAVADRLRACVRKHDIIARL
GGDEFAIVQIDADQPVGVTVLAQRIIAELSAPFEVLGHQVAVGVSIGIAMAPLDGDTVEQ
LMKNADMALYRAKEEGRGIYHFFEPGMDAKLQERRALEIDLRRAIDSNELELYYQPLISL
DTNEVSGFEALVRWQHPTRGMVSPVEFIPLAEEIGLIGVIGNWVLGQACADAMKWPSDVK
VAVNLSPLQFKNNALVLQVVGALAKSGLPGHRLELEITETVLLRDTDATVAMLNELRALG
VRISMDDFGTGYSSLGYLRKFPFDKIKIDRSFIQDLEANPDSIAIVRAVASIGHALGMAT
TAEGVETEAELLQLRHEGCTEVQGYLFSEPRPADEILSLMAHRTPKLEKEAV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgcctatcgttttccgcttcggcatcgccgccaaagccgcggtgcttatcgtc
tcccttggtgcgctatcggcgctcgctaacttcttcgtgcttgaaggggcgcaaagtctc
gatcgggttaatcgcgcaatgattgagcgtgttggacccgcgcgcctcgcgttgtccgat
gctaaggcggccctgaacgatgtcggcttggctgtttataaaagcatgtccgcatcggac
ttggacgatgcgcggatggccagccgagaagccatcaatcaaatcgcggctgcacgccgc
tggatctccgccgtcgccgattatttccccgcgcgtggcgcagattgcgacgtcatccag
agcaagctgctgtatctcgaaggcaccgtacgttcgcttcgcgatgcgatcctctcaagc
gacaagcaacgtcgcgctgatgaaatgctcgatctccgtttcgatgcggcgctcgacgac
gcgctagggcagatgaaccggctgaccaatctcctcggcgctgaatcgcgtgaagttctt
gctcaggcggaaaccgagcagaactcgatgtctgaggtcatcgtagcgattttggcgatc
ggcacgtcgttgatcgtcatattggcgttggcactcgtccactattcgcaggcgcgtccc
cttcgtcatctcagtgaagctgctctgcgcgttcgcgaaggcggggcgatgtcattggat
ctcgatgagaacgtgctcggccgctccgacgagatcggaacgctggcgcgttcgttccaa
tcgatgctgacgaagcttgccgaggcgcaagagtcgctggctgttcaatacgcacgcgtc
gatgctgcgatcaacaatttgcctcaggggctctgcatgttcgacgcggagcaaaatctc
atcatctgcaaccggcgctatgccgagctttacggtctgaagcccgagctgaccgtcgcg
ggcacgccccttcgatcgatattgcgggagcgccgcaagaacggccgtttctcgaaattc
caggaaatggctttggtcgatcatatcgagtcggccaccggtcgcgatccaatctatcgg
atcgaagaactgaccgatggccaggtcatcgctatttcccatcagccgatgcgcgacggc
ggctccatcgcaattcatgaagacatcaccgagcggcgcaagatggacgcgaaaatcgcc
catatggcacatcatgatgctctgaccgaccttcccaacagagtgcggttccacgaggct
atggaaatggcgcttaaaggtgccgagcacgatcacaccgtctcaattctttgtctcgac
ctcgacaacttcaagacggtcaacgatacgcttgggcatcccgtcggggacgccttgctt
caggctgtagcggatcggctgcgcgcttgcgtcaggaaacatgacatcatcgcgcgtctc
ggtggcgatgagtttgcgattgtgcagatcgatgccgatcagcctgttggcgtcaccgtc
ttggcgcagcgcattattgccgaattgagcgcgccgttcgaagtgttgggacatcaggtc
gccgtcggcgtcagcatcggcatcgcaatggccccgttagacggggacactgtggagcag
ctgatgaagaacgccgatatggcgctctatcgcgccaaagaagagggccgcggcatctat
cacttcttcgagcccggtatggacgccaagctgcaggaacgtcgcgcgctcgaaattgat
ctgcgcagggcaatcgatagtaacgagctcgaactctattaccagccgctgatttctctc
gacacgaacgaagtcagcggcttcgaagcgctcgtgcgctggcaacacccgacgcgcgga
atggtttctccggtggaattcattccgctcgccgaagagatcggtttgatcggcgtcatc
ggcaactgggtgctgggccaagcctgcgcagatgcgatgaaatggccatcagacgtcaag
gtcgctgtcaatctttcgccgctgcagttcaagaacaatgcgctcgttcttcaggttgtc
ggcgcgctggcgaaatcaggcctgcctgggcatcgcctcgaacttgaaatcaccgagacg
gttctgctgcgcgatacggatgcaacggttgcgatgctgaatgaactgcgcgccctcggc
gtccgcatctctatggacgatttcggcacgggctattcgagccttggttatctgcggaag
tttccgttcgacaagatcaagatcgatcggtcgttcattcaggatcttgaggccaatccg
gattccatcgccatcgtgcgcgccgttgcaagcatcggccatgcgctcggcatggcgacg
acggcggagggtgtcgaaacggaagcggaactgcttcagcttcgccatgagggctgcacc
gaggtgcagggctatctcttcagcgagccacggccggcggatgagattctgtctctgatg
gcgcaccggacaccgaagctggagaaagaggctgtctga
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