Halomonas meridiana: CTT34_16810
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Entry
CTT34_16810 CDS
T06424
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hmd
Halomonas meridiana
Pathway
hmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTT34_16810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmd03019
]
CTT34_16810
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_16810
Enzymes [BR:
hmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTT34_16810
Messenger RNA biogenesis [BR:
hmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CTT34_16810
DNA repair and recombination proteins [BR:
hmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CTT34_16810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Helicase_RecD
RPA_C
Motif
Other DBs
NCBI-ProteinID:
QHD51213
UniProt:
A0A857GPF0
LinkDB
All DBs
Position
complement(3559144..3561240)
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AA seq
698 aa
AA seq
DB search
MNRTDAEALLRTAVGNAAASFRSGQWEAIDALVNQRQKLLVVQRTGWGKSSVYFIATRIM
RDQGYGPTIIVSPLLALMRNQIESARRLGIHAITINSTNRDQAEALIQQVHTNQVDCLLI
SPEKLANEQFVEQALHPILDNVGLLVVDEAHCISDWGHDFRPDYRRLLNILRQMPPNMPV
LGTTATANNRVITDVVDQLGDIEVLRGPLVRDSLSLQNIVLADQASRLAWLSETIPTLQG
AGIVYVLTKRDAEQVKSWLLSQGIDAKAYYSGIEHSDFENSDQYREHLEDLLLNNQLKVL
VATTALGMGYDKPDLHFVIHYQTPGSIVSYYQQVGRAGRGIDESLGILLSGAEDERIHDF
FRRSAFPNQSQINQVLSVLEDSDGLSVPKLEERLNMRKGQIEKVLKFLSVENPAPVYKAG
SQWTRTPVAYQLDHDQVQRLTNMREQEWQEIQEYTTTSGCLMEYLRRSLDDPEAQPCGKC
ANCLGAPLGSASPDRQRVIAAAQFLRHSEFVFKPKVQVAANGFPQYGLRGNLPQNLRAQE
GRVLSRWADAAWGGFVEQDKHGGYFRDELVDAMAEMIQQRWQPTPRPEWVTCVPSLKHPE
LVPEFARRLANKLGLPFHPVISKVQDNEPQKLQNNRYHQCSNLDGVFAVDAGLPSGPVLL
VDDVVDSGWTMTVLAALLRQQGSGEVYPVALASSATGD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaccgatgctgaagcattgctgcgtactgcggtgggaaacgcagccgcaagc
ttccgtagtggccaatgggaagccattgatgctttggtaaatcagcgccaaaagctactg
gtggttcaacgaaccgggtggggcaaaagctctgtctatttcatagcgacccgaatcatg
cgtgatcagggctatgggcccaccatcattgtctcgcctttgctggccttgatgcgtaat
cagattgaatcagctcgaagactgggtattcacgcgatcaccatcaactctaccaaccgt
gatcaagcggaagcattgatccagcaggtacatacaaaccaggtggattgtttgttgatc
tcaccggaaaagctggccaacgagcagtttgttgagcaagcgctccaccctattctggat
aacgtagggttattggttgtggatgaagcgcactgtatctcggactgggggcacgacttt
agaccggattatcgtcgcctgctcaatattttgcgccagatgccccccaacatgccggta
ttaggtacaacggccaccgccaataatcgggtcattacagatgttgtagatcagctgggt
gatattgaggtgctccgcggccctttggttcgcgatagcttgtcccttcaaaacattgtc
cttgcagatcaggcaagtcgtctcgcctggctgtcagaaacaataccgactctgcagggg
gctggaatcgtctatgtgcttacaaagcgagatgcagaacaggtaaaaagctggctgttg
agtcagggaattgatgccaaggcctactacagcggcattgagcattctgatttcgagaac
tccgatcagtaccgggagcatctggaagatctgctgctcaacaatcagctgaaggtgctt
gtagccacgacggcactgggcatgggttacgacaaacccgatcttcacttcgttattcac
taccaaacaccgggctcaatcgtatcctattaccagcaagtaggccgggccggtcgcggt
attgacgaatctctcggcattctactttcaggggcggaggatgagcgtattcacgacttc
ttccgtcgctccgcatttccgaatcaatcccagattaaccaggtgctttccgttctcgag
gacagtgatggcttatctgtaccgaaactggaagaacgcttgaatatgcgcaaagggcaa
atcgaaaaagtccttaagtttctgagcgtggagaaccctgcgccggtttacaaagcgggc
agccaatggacaagaacaccggttgcttaccagctagatcatgaccaagtccagcggctc
acgaacatgcgagagcaggagtggcaagaaatccaggagtacacgacaacttcgggctgc
ttgatggaatatctgcgaaggtctcttgatgacccggaggcgcaaccctgtggcaagtgc
gctaactgtcttggtgcgccgctgggcagtgcctcgcccgatcgccaaagagtcattgct
gcagcgcagttccttcgccactcagaattcgttttcaaacccaaggttcaagtggccgcc
aatgggtttccgcaatacggattgcgagggaacctgccacaaaacctcagagcgcaggaa
ggcagagtacttagtcggtgggctgacgcagcatggggcggtttcgtcgaacaggacaaa
catgggggctatttccgggatgaattagtggacgccatggcggaaatgattcagcagcgt
tggcagccaacgccacggcctgagtgggtcacctgcgtaccctcgctcaagcaccccgaa
ttggtgccggagtttgcgcggcggctggcgaataaactgggtctgccattccatccggta
atctccaaagtgcaggataacgaaccacaaaaactacagaacaaccgctatcaccagtgc
agcaacctggatggagtgttcgcggttgatgcaggcctcccttccggcccagtcctattg
gtggacgatgtcgtcgattccggttggaccatgaccgttctggcagccttacttcggcaa
caaggcagtggcgaagtctatccggtcgctcttgcctcttctgcaacgggagattga
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