Hydra vulgaris (swiftwater hydra): 100201758
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Entry
100201758 CDS
T01080
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100201758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100201758
Enzymes [BR:
hmg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100201758
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100201758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
100201758
NCBI-ProteinID:
XP_012566762
UniProt:
A0A8B7E8A8
LinkDB
All DBs
Position
8:6873530..6906428
Genome browser
AA seq
339 aa
AA seq
DB search
MWNFLPCSEKEINLKLILSGGQSFRWKTNSEAPNIWFNVLNKKLWYLEQKDDGIYYKTVK
STCLSDNNKCINDDITDKKFLYDYFQLDIDISKLYEEWRRVDNNIKVLSDCNFYGIRVLK
QDPVENLFSFICSQNNNIVRISQLVEKLCVFFGEKIVCDNKEVFCFPTVQALAVTGVEDA
LRKLGFGYRAKFIHHAAKSIIEEHGNENWLFDLRNKSYEEAIQNLCSLPGVGAKVADCVC
LMSLNKKNAIPVDTHMWQIASQYYMPHLKSNKTLTSKVYKDIGNFFRELYGEYAGWAHSV
LFTTDLKKNKLMTKTSLLKLKSKRKSDKDRKTSKKKKLH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattttttgccgtgttcagaaaaagaaataaatttaaagctaattttatctggt
ggtcaatcgtttcgatggaaaactaattctgaagcaccaaatatttggtttaatgttctt
aataaaaaattatggtatttagaacagaaggatgacggaatttactataaaactgttaag
tcaacttgtctatcagataataataaatgtataaatgatgacatcacggacaaaaagttt
ttatatgattattttcaacttgatatagatatatctaaactttatgaagaatggcgaagg
gttgataataatataaaagtattgtctgattgtaacttttatggaattcgagtgcttaaa
caagatcctgttgaaaatttgtttagttttatatgttctcaaaataataatatcgttaga
atatcacaattggttgaaaaattatgtgttttttttggcgaaaaaatagtttgtgataat
aaagaagttttttgttttccaacagttcaggctttagctgtgactggagttgaagatgct
ctacgaaaattaggatttgggtacagagctaagtttattcatcatgctgccaaaagtatt
atagaagaacacggcaatgaaaattggttatttgatttaagaaacaagtcttatgaagaa
gctattcaaaatctttgctcattgcctggagttggggctaaagttgctgattgtgtttgt
ttaatgtctttgaacaagaaaaatgccatccctgtagatactcacatgtggcagattgca
tctcaatactatatgccacacttaaaaagtaacaaaactctcacaagcaaagtgtataaa
gatataggaaatttttttcgtgaactttatggtgaatatgctggatgggctcattctgtt
ttatttacaacagatttgaaaaaaaataagttaatgaccaagaccagccttttgaaatta
aaatccaaaagaaagtctgataaagatagaaaaacctcaaagaaaaaaaagcttcattaa
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