Hydra vulgaris (swiftwater hydra): 100206030
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Entry
100206030 CDS
T01080
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100206030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100206030
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
100206030
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
100206030
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
100206030
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100206030
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
100206030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
zf-C2H2_ZNF462
Motif
Other DBs
NCBI-GeneID:
100206030
NCBI-ProteinID:
XP_002167319
UniProt:
A0A8B6XRZ9
LinkDB
All DBs
Position
7:38630697..38631374
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AA seq
200 aa
AA seq
DB search
MFNNVTSTANTSSTHLKASANSNNCWKNGLIKSLSDKKFIIEETDNLFVLKDKFPKAKHH
YLVVSKYIPSIEALTLKDIELVKHMIYVGEALIKKNKKESCEFQTGFHAIPSMNMLHMHV
ISCDFESIYMKNKKHWNSFTTEFFRPACEILKELSIAGKIIINKLHYESFLSYPLKCHKC
NERPSNMPKLKTHIKDHTNI
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatgttactagtactgctaatacttcatccacacatttaaaagcgtcagca
aatagcaataattgttggaaaaatgggttgattaaatctttatctgataaaaagtttatt
attgaagagactgataatttatttgttttaaaagataaatttcccaaagctaagcatcat
tacctagttgtatcaaagtatataccatcaattgaagctttaactttaaaggatatagaa
ttagtgaagcatatgatatatgtaggagaagccctaattaaaaagaataaaaaagaaagt
tgtgagtttcaaacaggttttcatgctatcccaagtatgaatatgctgcatatgcatgtt
attagttgtgattttgaatcaatttatatgaaaaataaaaaacattggaattcatttaca
acagagttttttagaccagcttgtgaaatactcaaggaactaagcatagcaggaaaaatc
ataattaacaagctgcattatgaaagttttttatcttatccattaaagtgccacaagtgt
aatgaaagacctagtaatatgccaaaattaaaaactcacatcaaggaccatacaaatata
tag
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integrated database retrieval system