Hydra vulgaris (swiftwater hydra): 100211060
Help
Entry
100211060 CDS
T01080
Name
(RefSeq) protein polybromo-1
KO
K11757
protein polybromo-1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100211060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100211060
03036 Chromosome and associated proteins [BR:
hmg03036
]
100211060
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100211060
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
100211060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
DUF7877
Motif
Other DBs
NCBI-GeneID:
100211060
NCBI-ProteinID:
XP_047146441
LinkDB
All DBs
Position
13:21132202..21197715
Genome browser
AA seq
1556 aa
AA seq
DB search
MPPKRRLLREDSESSEEYRSKRLRSATLKDEPEEDLDLNSIGVYKEIVDYLCTILDENDR
PICEMFNKLPSKDALPVYYDIISEPIDFQTIKKKIKTQQYLTINDLEADIFLLIKNAHAF
NESKSQIYKDATQLKKSYLNKKSELSKIAMKTGKKPKLSSRQLSIEAEDKTEDVSIVEQL
KSPLYKSFESTPQGTPSKDDGLIDDSYEHDTYSILYNMVVAYTDQTGRRLSAHFVRLPHK
RAHQSFYEVVKNPISLCKIRSRIKIHYYSDLKMIENDFNLVFSNALKFYPPDSIQYQDAH
TLNAFMHEKIKEMDHCEEYQTFLKTERTGSISHKFKSESSPIVTPLKKRGRQPKDASKTL
IDGLKIFSDHAKKLFDFIMEYKNSEGRFLFKMFHVLPDKKEFAEYYEIISKPIDLKTIGE
RINANHYVSEYQLMKDFNILFKNARKFNEEGSQIYNDSITLEKALKKKMLEFFPEEKVIP
LKNIRLSNSSIGQSKGLFTNKCHELLSYVQEFKDDYGNKLSAVFEKLPSRLEYPDYYQLI
KRPIDLSYISSRINKYTSIDDLEQDLMLLFNNACHYNEPDSQIYKDAIVLLRAMIAKKNE
ISPDLNTFVPDVAGLVHKLLESLYTSVMQHKDEEGRCYSDSLVEHIVKDDSKNGYQRKPI
SLIIIGQLLQLRFYKRLDRLQEDIFLIFNNVRKTCSTETEMYEDACQLQIHFIIERDRLT
KDGLHFLSQSAINITLKKLQHEIDVERNEKQISENQEHLDELDGLGKVTTTGLKGMMALE
VQPDEETLTYANSIVFNGINYSVGDFVYMSTDENNRPPHIVSIEKIWKQENGLEGLYGNW
YFRPEDTFHLASRKFMEQEVFRNLHSSYMTFQRVIGKCYVMNVKDYPKYRPEGFEDKDVF
VYESRYNMKMKSFKKVKTFLPHAAHVVLVERDQLLTIKRFSTITPESSQFSQSDKSDKSN
QVIESTDGYEHPKEEHCKTEVSSPDSGCTYYEKYVTDTDSYKIGDGVYVKCDEDYLLMSK
IDKIWTDSSGTPYFQGNWYLTPEDTKHVPTQLFYEKECFESTVECVEMLSQVAGKCAILN
LRDYQFLRPTEIDEKHVYICSAIYIEEEMKFRRRTKGFKRAILPANVRDDELWYFDESIN
PNRRPSLWLMPWGEQDIAVPEQKAEESGYSLMKKEYTSLLMKENFSLDEAEAKALEKWNG
MSNEEKNDYKLRQKNLLASTLYIYECGWGICDYQFEEKSDLIVHVMEGAHLSKKGLRMQY
GCLWRGCLRKINNLPAFSTHSRLLHHIREVHFKNAGKRICRNEKSRSFFLRYQSCDQDTK
ESSGDESSTSSSSSLSPVNIKTSPKFPQVNLSINNPVIKSPVATELAPSSFSKVNISKPA
VQAYNQLRAQATNISQQSIMNPVINPVSSQILPQVPSHQQIPLHQPIPMHQQGLGMSVEQ
QQMLFMQVQRQQQQIQQLEEKIAQLQNGKDDVVFVSPPESSLKLRHSEIYVRYIEGLRDN
RNQLSNWSELANENHPLPSAQLPTHWFTSSCENIHQALWQLRDRMLRDAAALSKII
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaaagaaggttgttgagagaagatagcgagtcttctgaagagtatagatca
aaaaggttgcgatcagcaactcttaaggatgagccagaagaagatttggatttgaactcg
ataggtgtttacaaagaaattgtagattatttatgcacaattcttgatgagaatgacagg
cctatttgtgagatgtttaacaaacttccttctaaagatgctttgccagtgtattatgac
ataataagtgaacccattgactttcagactattaaaaaaaagatcaaaacccagcagtat
cttactattaatgacttggaggcagatatatttctccttataaaaaatgcccatgctttt
aatgaatcaaagtctcaaatttacaaggatgcaacacagctcaaaaagtcttatttgaat
aaaaagtctgaattaagcaaaatagctatgaaaactggaaagaaaccaaaattgagttca
aggcaactatctatagaagccgaagacaaaacagaagatgtttctattgttgagcaactt
aaaagtcctctttataaaagttttgaatccactcctcaaggtacaccttcaaaagatgat
gggttgattgatgattcatacgagcatgatacatattcaattttatacaacatggtagta
gcatatacagatcaaactggaaggcgtttatcagcacattttgttcgactgccacacaaa
agagctcatcaaagtttttatgaggttgttaaaaatccaatatcgctatgcaaaataaga
agcagaatcaagatacattattactcagatttgaaaatgatagaaaatgatttcaatttg
gttttcagcaatgctcttaaattttatcctccagattcaattcaatatcaagatgctcat
accttaaatgcatttatgcatgaaaaaataaaagaaatggatcactgtgaggaatatcag
acatttctaaaaactgaaagaactggaagcatttcacataagtttaaaagtgagagttct
cccatagttacaccattgaaaaagcgaggtaggcaacctaaagacgctagcaaaactcta
atagatggtttgaagattttttctgatcatgctaagaaattgtttgactttattatggaa
tataagaattccgaaggtcgttttttgtttaaaatgtttcatgttttacctgataaaaaa
gagtttgcagagtattatgaaattatttcaaaacctattgatcttaaaacgattggggag
agaatcaatgcaaatcattatgtttctgaatatcagttaatgaaagatttcaacattttg
tttaaaaatgctcgtaaatttaatgaggagggttctcagatttataatgactctattaca
ttggaaaaggcgttaaaaaagaagatgcttgaattttttccagaggaaaaagtaatacct
ctaaaaaatataagattgagtaactcatctattgggcaatcaaaaggtttatttacaaac
aagtgtcacgaattgctttcctatgtgcaagaatttaaagatgactatggtaacaagttg
tcagctgtatttgaaaagctaccttcaagattggaataccctgattattaccaactcatt
aaaagaccaattgatctctcttatattagttcaagaataaataagtatacatcaattgat
gacctcgaacaagatcttatgttactgtttaacaatgcatgccactataatgaaccggat
tcacaaatttataaagatgctattgtacttctccgtgccatgattgcaaagaaaaatgaa
atttcaccggacttaaatacgtttgttcctgatgttgctggacttgttcacaagttgttg
gaatctttgtatacaagtgtaatgcagcacaaggatgaagaaggtcgttgttatagtgac
tctcttgttgaacatattgttaaagatgattcaaaaaatggatatcagaggaaacctata
tctttgattatcattggacaattactacaattgagattttacaagcgtcttgatcggttg
caagaagatatttttttgatttttaataatgttagaaaaacatgtagcactgaaactgag
atgtatgaggatgcctgccaacttcaaatacattttattatagaacgtgataggttgaca
aaagatgggttacattttctgtctcaatctgcaattaatatcactttaaagaaattgcaa
catgaaattgatgtagagcgtaatgagaagcaaataagcgaaaaccaagaacaccttgat
gagttagatggcttgggtaaagtgaccacaacaggattaaaaggaatgatggctttagaa
gtacaaccagatgaggaaactctgacttatgcaaactccattgtttttaatggaattaat
tattcagttggagattttgtttatatgagtacagatgaaaacaatagacccccacatatt
gtttctattgaaaaaatatggaaacaagaaaatggattagaaggattatatggaaattgg
tattttcgaccagaggatacatttcacttagcttcaagaaaatttatggagcaggaggtg
tttagaaatctgcattcaagttatatgacttttcaaagagttataggaaagtgttatgtc
atgaatgttaaagactatccaaagtacagacctgaagggtttgaagacaaagatgtattt
gtatatgaaagcagatataatatgaagatgaaatcatttaaaaaagtgaagacatttcta
ccacatgcagctcatgtggttcttgttgaacgtgatcagttgttaactataaaacgtttt
tcaaccattactccagagagtagtcaattttcacaaagtgacaaaagtgacaaaagcaat
caagttattgagtcaactgatggttatgagcaccctaaagaagaacattgtaaaactgaa
gtatctagccccgacagtggttgcacttactatgaaaagtatgtcactgatacagatagt
tacaaaattggtgatggtgtttatgtaaaatgtgatgaagattatttgctgatgtcaaaa
attgataaaatatggactgattcaagtggtactccatactttcaaggcaactggtacctc
acacctgaagataccaaacatgttccaactcaattgttttatgaaaaagaatgctttgaa
agtacagtggaatgtgttgaaatgctttctcaagttgcaggaaaatgtgcgatacttaac
ttgcgagattatcagtttttgcgaccaacagaaattgatgaaaagcatgtatacatatgt
agtgctatatatattgaagaagaaatgaaattcagaagaagaacaaaaggatttaagaga
gcaattcttcctgctaatgttcgtgatgatgaactgtggtactttgatgaaagcattaat
ccgaacagacgaccttctctatggttgatgccttggggagagcaagatattgcagttcct
gaacaaaaagcagaggagtctggatatagcctcatgaaaaaagaatatacatcattacta
atgaaagaaaacttttctctggatgaagctgaggctaaagctttggaaaagtggaatggc
atgtcaaacgaagaaaaaaatgattacaagttgcgtcagaaaaacctgttggcctctacg
ttatatatttatgagtgtggttggggcatttgtgactatcaatttgaagaaaaatctgat
ctcattgtgcatgttatggaaggagctcatctttctaaaaaaggtttacgaatgcaatat
ggttgtctatggagaggctgtttgcgcaaaataaataatctgccagctttttcaactcac
tcaagattgctgcatcacatacgcgaggttcacttcaaaaatgctggtaaaagaatatgt
cgcaatgaaaaatctaggtccttttttcttcgttatcaatcttgtgaccaagatacaaaa
gaaagcagtggggatgaatcttctacatcttctagttcttctctttctcctgtcaatata
aaaacctccccaaagtttccgcaagttaatttatctataaacaatcctgttattaaatct
ccagttgcaactgaattggcaccttcttctttttctaaggtgaacatctcgaagcctgct
gttcaagcttacaatcaacttcgtgcacaagcaacaaatatatctcaacaatctattatg
aatccagttataaatccagtttcctcgcaaattttgcctcaagtcccctcgcaccaacaa
atcccattacaccaaccgattccaatgcatcagcaaggattaggcatgtctgtcgaacag
cagcaaatgttatttatgcaagttcaacgacaacagcagcaaattcagcaacttgaagaa
aaaattgctcaacttcaaaatggtaaagatgatgttgtttttgtctcaccaccggagagc
tctttaaaattgcgtcattcggagatatatgtaagatacattgaagggcttcgtgataat
agaaaccaacttagtaactggagtgaacttgctaatgaaaaccatcctctaccttctgct
caattacccacacactggtttactagtagttgtgaaaatatccaccaggctttatggcaa
cttcgtgatagaatgttaagagatgcagctgcattgtccaaaattatttaa
DBGET
integrated database retrieval system