Hydra vulgaris (swiftwater hydra): 100215195
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Entry
100215195 CDS
T01080
Name
(RefSeq) uncharacterized protein LOC100215195
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03440
Homologous recombination
hmg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100215195
03460 Fanconi anemia pathway
100215195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmg03032
]
100215195
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100215195
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100215195
DNA replication proteins [BR:
hmg03032
]
Eukaryotic type
DNA Topoisomerases
100215195
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100215195
FA (Fanconi anemia) pathway
100215195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
DEAD
Helicase_C
Toprim
ResIII
P-loop_SecA
SHS2_FTSA
Motif
Other DBs
NCBI-GeneID:
100215195
NCBI-ProteinID:
XP_002155556
LinkDB
All DBs
Position
10:45176564..45207467
Genome browser
AA seq
1322 aa
AA seq
DB search
MNRQNTMFQSHYDQYPMYQSQRYLDQQQGSQQQQYPIENDNSELKEFGDMGAAVKKFAEA
SYSKTNNYDSVDVAENIPEINDFNPYRKSHGLVAWDNFGGQIPDPYQRFEDFRGLNPAQL
KALYNSGYKAPTPIQAQTWPIAMFDRDVVSIAKTGSGKTLAFLLPAYMKINLRRSQGTIS
VLVLAPTRELATQIQLEAEKFGSVAGYYSACAYGGAPKRNQLQAINSGISVLVATPGRLN
DFLESNEVNLSSVFYLVLDEADRMLDMGFEPQIRTIIRCLPRKRQTLMFSATWPEEVRRL
ADDFLYQPVHIRLGIVGGSTSSGLQANEMIKQHLILLNSGEDKDGELINLIKSRFHQNRD
LVLIFVARKNTCDFLTNILNRVGIAASAMHGDRDQKYREKTLAAFRDGSRPIMVATDLAS
RGIDVRGISAVINYDLANSTEDYVHRIGRTGRAGMSGESFTFLTRSNDDIWKAIGIVEVM
AKTGQYPPPAVQELINRVKMRQEQNKERRAAENEQFSKVLIVAEKPSVAKMIAEQLSGGH
FRTRRGKSRANQIFEFIKWFGPAQQKCKLMVTSVVGHIFGLGFAGRPDRDISKLFDASVE
KQLADSTKKLNIVEHLQELGQESEYLFLWLDCDREGENIGFEVISLTQQWIPYDNVYRAR
FSALTKTELSQAYDNPVRPDKYAAMSVDARQELDLKIGVAFSRLMTRAFLDMAKEKFRLK
DQKVVSYGPCQTPTLWFCVQRHKEIQNFKSTPFYVVSVVVNIQGQNITLKWVNDTVKNAE
DLRQMESIIQRNPVAHIVDVKEDKKVVYKPIGLNTVTLLKSCSKGFGISPTQAMNIAEHL
YTSGYISYPRTETTRYPPTFDLVGTLEEQVNNPNWGRIAAYILESGRMNPSQKGFDVGDH
PPITPMRSANRDEFKPNEWRIYDYVTRHFIGTLHDNMEYIEKKMLVDVNGFQFEYVWHEI
TDKGFMWAMPWKLKGLKLNESYMPPINMLQGLTTGVLNFLKDEKYTQPPDYLQESELISL
MDKHGIGTDASIPTHIKNVQDRHYVDVCGPSEGGQRGQLIQENKFFGKNSRGKGQKQQPK
ALSRHMVPRGFGLAFLSCFEDLDKELCEPSIRAYMEQQVSKIATGETDKNEVVSSNLKLF
QQKFIYYRENLERVSKYFAPKVQGGHSGRDFSGDNSNQNYRAGDYRQNNIQKKDFGSRGR
GRGDLHRGGRGGSSRGGRGGNFNSNEQYKAQNFENRYQNDGYGSYNQNENNFKVENQTGG
NFQVNSFVNQGGFQNSGQRGSFRGGYNNNRGMDMRSYNNVGIKRSNPSEIPADDVKRFHH
SY
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacaaaatacaatgtttcagtctcactatgatcagtatcctatgtatcagtcc
caaagatatttagatcaacaacagggcagtcagcagcaacaatatcctattgagaatgac
aattctgagttaaaagagtttggtgacatgggtgcagctgtgaaaaagtttgcagaagct
agttattctaaaactaataattatgattctgtagatgttgctgaaaatattcctgaaata
aatgattttaacccttatagaaaaagtcatggtttggttgcttgggataattttggagga
caaattcctgatccatatcaaagatttgaagattttagaggtttaaaccctgctcaatta
aaagcactttacaattcaggttacaaggctcctactcctattcaagctcaaacatggcca
attgcgatgtttgatcgggatgttgtatcaattgcaaaaactggttcaggtaaaacgcta
gcatttttattaccagcatatatgaaaataaatctcagaagatctcaaggtacaatttca
gtattagttttagccccaacaagagaattagctacacaaattcaattagaagctgaaaag
tttggaagtgttgctggatattatagtgcatgtgcctatggtggcgcaccaaaacgtaat
cagctacaagcaattaattctggaatttccgttttagtagccacacctggtagattaaac
gactttctagagtctaatgaagttaacttgtcatcagttttttatttagttttggatgaa
gctgatagaatgcttgatatgggttttgaaccacaaattcgaacaattataagatgttta
cctcgtaaaaggcaaaccttgatgttttcagccacttggccagaagaggtaaggcgttta
gctgatgactttttatatcaaccagttcatattcgtcttgggattgtcggtggtagcact
agtagtggcttgcaagctaatgaaatgattaaacaacatttaattttattaaattcaggt
gaagacaaggatggagaacttattaatttgattaaatcaagatttcatcaaaatagagat
ctggttctgatctttgttgccaggaaaaacacctgtgattttttaactaatattttaaat
cgagtggggatagcagcctctgctatgcatggtgatcgagatcaaaagtacagggaaaaa
actttggctgcttttcgagatggttcaagacctataatggttgctacagatttagcttct
aggggtattgacgttagaggtatcagtgctgtgataaactatgatcttgcaaatagtaca
gaagattatgttcatcgaattggaagaactgggcgagctggcatgtctggtgagtcattc
acatttctcacacgcagcaatgatgatatttggaaagcaataggaattgttgaggttatg
gcaaaaacaggtcagtatcctccaccagctgttcaggaacttatcaatagggttaaaatg
cgtcaagaacagaataaagagcgtcgtgctgctgaaaatgagcagttttcgaaagtactt
attgttgcagagaagccttctgttgctaaaatgatagctgaacaattatctggaggacat
tttcgcacaagacgtggcaaaagtcgtgctaatcagatttttgaatttataaaatggttt
ggacccgctcaacaaaaatgtaagttaatggtgacatcagttgtaggccatatctttgga
ttagggtttgctggccgtccagacagagatatatcaaagttgtttgatgcttcagtagaa
aaacaacttgctgatagcacaaaaaaattaaacattgttgaacatttacaagaattaggt
caagaatctgaatatcttttcctgtggttggactgtgatagagaaggagagaatattggt
tttgaggtaatatctttgactcaacaatggattccttatgataatgtgtacagagcacga
ttttctgcactcacaaaaactgagctttcacaagcatatgataatcctgtaagacctgat
aagtatgcagcaatgagtgtggatgcaagacaggaactggatctcaaaattggggtagca
ttttcaaggttaatgactcgtgcatttttggacatggcaaaagaaaagtttcgtttaaaa
gatcaaaaagttgttagttatggtccttgtcaaacaccaacactttggttttgtgtacaa
cgtcataaagagattcaaaatttcaaatcaacaccgttttatgttgtctctgttgttgtc
aacattcagggtcaaaatattactttaaaatgggtcaacgacactgtgaaaaatgcagaa
gatctcagacaaatggagtcaattatacaaagaaatccagttgcacatattgttgatgtt
aaagaagataaaaaagtcgtatataagccaataggtttaaatacagtaacgttattaaag
tcttgctccaaaggatttggtatttcgccaacacaagcaatgaatatagctgagcactta
tacacatcaggttatatttcatacccacgtactgaaactactcgatatcctccaactttt
gatcttgttggtaccttggaagaacaagtcaataatccaaattggggtagaattgctgca
tatattctagagtctggcagaatgaacccatcacaaaaaggttttgatgttggggaccat
ccaccaataactccaatgagatctgcaaatagggacgagtttaaacctaatgaatggcgt
atctatgactatgttactcgtcattttattgggacacttcacgataatatggaatatata
gaaaagaaaatgttagttgatgttaatggttttcaatttgaatatgtttggcatgagatt
acggacaaaggttttatgtgggcaatgccgtggaagttaaaaggtctaaaattaaatgaa
tcttacatgcctccaattaatatgttgcaggggttaacaacaggagtcttaaattttctc
aaagatgaaaagtacacacaaccaccagattatcttcaggaaagtgagctcatatctctt
atggataagcatgggatcggtactgatgcttcaatacctacccatataaaaaacgtccaa
gatcgtcattatgttgatgtttgcggtcctagtgaaggtgggcagcgtggtcagcttatt
caagagaataagttttttgggaaaaatagtcgtggcaaaggacaaaaacagcagccaaaa
gcactttctcgtcacatggtacctcgtgggtttggtttagcatttctatcatgctttgaa
gatctggataaagaactttgtgaaccttcaattcgtgcttatatggagcagcaagtcagc
aaaattgctacaggtgaaacagataaaaatgaagttgtctcaagtaatcttaagttattt
caacagaagttcatttattatagagaaaacttagaacgtgttagtaagtactttgcaccc
aaagttcagggtggccactctggaagagactttagtggtgataactcaaatcaaaattac
agagcaggggattatagacaaaataatattcagaaaaaggattttggaagcagaggtaga
ggtagaggtgatttacataggggaggaagaggaggttccagtaggggaggtaggggtgga
aattttaatagtaatgaacagtacaaagctcaaaactttgaaaacagatatcaaaatgat
ggatatggttcttacaatcaaaatgaaaataattttaaagttgaaaatcaaacaggtggt
aatttccaagtaaatagtttcgttaatcaaggaggttttcaaaatagtggccaacgaggc
tcttttagaggaggttataacaataatagaggaatggacatgagaagttacaataatgtt
ggaataaaaagatctaatccttcagaaattccagctgacgatgtaaaacgttttcatcat
tcatattag
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