KEGG   Helcobacillus massiliensis: R3I40_00780
Entry
R3I40_00780       CDS       T09498                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
hmm  Helcobacillus massiliensis
Pathway
hmm00230  Purine metabolism
hmm00240  Pyrimidine metabolism
hmm01100  Metabolic pathways
hmm01232  Nucleotide metabolism
Module
hmm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
hmm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:hmm00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    R3I40_00780 (nrdE)
   00240 Pyrimidine metabolism
    R3I40_00780 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmm03400]
    R3I40_00780 (nrdE)
Enzymes [BR:hmm01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     R3I40_00780 (nrdE)
DNA repair and recombination proteins [BR:hmm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    R3I40_00780 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: WOO93160
LinkDB
Position
162135..164267
AA seq 710 aa
MPAHEHSKALDYHALNAMLNLYDSNGQIQFDKDREAAREYFLQHVNPNTVFFHSLSEKLE
YLVDNEYYEKEVLDQYDFSFIESLSAQAYAHKFRFKTFLGAFKYYTSYTLKTFDGKRYLE
RFEDRVMMVALTLARGDEELARSIVDEILTGRFQPATPTFLNAGKAQRGELVSCFLLRME
DNMESIGRGVNSALQLSKRGGGVALLLSNLREYGAPIKQIQNQSSGVIPVMKLLEDSFSY
ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELARNNE
PMYLFSPYDVERVYGKPFADVNISEHYREMVDDHRIAKKKIKAREFFQTIAEIQFESGYP
YILFEDAANRANPIAGKITHSNLCSEILQVSTPSEMNTDLSYSELGRDISCNLGSLNIAY
AMDSEDFAKTIDTSIRALTAVSDTSDIDSVPTIANGNAKSHAIGLGQMNLHGYLAREHIH
YGSEEGLDFTNMYFLTVTYHAIKASMGIAKERGEKFYDFENSKYASGEFFQKYIEKEWAP
QTEKVRSLFEKSNAHLPTQEDWKQLAEDVKTHGMYNAYLQAVPPTGSISYINHSTSSIHP
IASKVEIRKEGKIGRVYYPAPFMTNENLEYFQDAYEIGYEKIIDTYAVATQHVDQGLSLT
LFFPDTATTRDLNRAQIYAWRKGIKTIYYIRLRQMALEGTEIEGCVSCML
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgccggctcacgagcactccaaggcgctcgactaccacgcgctcaacgcgatgctgaat
ctctacgactccaacggtcagattcagttcgacaaggaccgggaggcggcacgggagtac
ttcctgcagcacgtcaaccccaacacggtcttcttccactcgctcagcgagaagctcgag
tacctcgtggacaacgagtactacgagaaggaggtgctcgaccagtacgacttctcgttc
atcgagtccctctccgcccaggcctacgcgcacaagttccgcttcaagaccttcctcggc
gccttcaagtactacacctcgtacacgctgaagaccttcgacggcaagcgctacctcgag
cgcttcgaggaccgcgtcatgatggtcgcgctcaccctcgcccgcggcgatgaggagctc
gctcgcagcatcgtcgatgagatcctcaccggccgcttccagcccgccaccccgacgttc
ctcaacgccggcaaggcgcagcgcggcgaactcgtctcctgcttcctcctgcgcatggag
gacaacatggagtccatcggccgcggcgtgaactccgccctgcagctgtccaagcgcggc
ggcggtgtggccctcctgctgagcaacctgcgcgagtacggcgcgcccatcaagcagatc
cagaaccagtcctcgggcgtcatccccgtgatgaagctgctggaggactccttctcctac
gccaaccagctcggtgcccgtcagggcgccggtgcggtgtacctgcacgcccaccacccg
gacatcctgcgcttcctcgacaccaagcgcgagaacgccgacgagaagatccgcatcaag
accctctccctcggcgtcgtgatcccggacatcaccttcgagctcgctcgtaacaacgag
ccgatgtacctgttcagcccgtacgacgtcgaacgcgtctacggaaagccgttcgccgac
gtcaacatctccgagcactaccgcgagatggtcgatgatcaccgcatcgccaagaagaag
atcaaggcgcgcgagttcttccagaccatcgcggagatccagttcgagtccggctacccc
tacatcctgttcgaggatgcggcgaaccgtgcgaacccgatcgccggcaagatcacgcac
tccaacctgtgctcggagatcctgcaggtctcgactccgtcggagatgaacaccgacctc
tcctactcggagctcggccgcgacatctcctgcaatctcggctccctcaacatcgcctac
gcgatggactccgaggacttcgccaagacgatcgacacctcgatccgcgccctcaccgcg
gtctcggacacctccgacatcgattcggtgccgaccatcgccaacggcaacgcgaagtcc
cacgccatcggcctcggccagatgaacctgcacggctacctcgcccgcgagcacatccac
tacggcagcgaggagggcctggacttcacgaacatgtacttcctcacggtgacctaccac
gccatcaaggcgtcgatgggcatcgcgaaggagcgcggtgagaagttctacgacttcgag
aactcgaaatacgcctccggtgagttcttccagaagtacatcgagaaggagtgggccccg
cagaccgagaaggtccgctccctgttcgagaagtccaacgcgcatctgcccacgcaggag
gactggaagcagctcgccgaggatgtgaagacccacggcatgtacaacgcgtacctgcag
gccgttccgccgacggggtcgatctcctacatcaaccactccaccagctcgatccacccg
atcgcgtccaaggtggagatccgcaaggaaggcaagatcggccgcgtctactacccggct
ccgttcatgacgaacgagaaccttgagtacttccaggacgcgtacgagatcggctacgag
aagatcatcgacacctacgccgttgccacgcagcacgtggaccagggcctgtcgctgacc
ctcttcttcccggacaccgccaccactcgtgatctcaaccgcgcgcagatctacgcgtgg
cgcaagggcatcaagaccatctactacatccgtctgcgccagatggcgctcgagggcacc
gagatcgagggctgcgtcagctgcatgctgtga

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