KEGG   Hymenobacter nivis: DDQ68_04835
Entry
DDQ68_04835       CDS       T05498                                 
Name
(GenBank) subtype I-B CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
hnv  Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:hnv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hnv03400]
    DDQ68_04835
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hnv02048]
    DDQ68_04835
DNA repair and recombination proteins [BR:hnv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     DDQ68_04835
Prokaryotic defense system [BR:hnv02048]
 CRISPR-Cas system
  Universal Cas proteins
   DDQ68_04835
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: AWM32175
UniProt: A0A2Z3GML4
LinkDB
Position
complement(1118807..1119817)
AA seq 336 aa
MKKTFCLFNPGRLSRQDNTLKYTAYDEAGAEGQTRFLPIEDVADLYVFGSLDANSALYNF
LGKHGVSVHFFDYYEHYTGSFMAKEYLLAGRLQVAQTGHYTGLNKRLVLARKLVEGAAFN
LLKNLRYYQSRGRVVGEEIVQMELYVSALPHATSVAEIMGYEGNIRQTYYRCFEQLVSAP
GFAFGTRSTQPPQNELNALISFGNMLCYAACLSQIYHTQLNPTISFLHEPGTRRFSLALD
MAEIFKPLLVDRTIFRLVNKKEIQPRDFVRELDGCLLKESGRKTFVRVFEERMKETIQHR
RLNRAVSYQHLIKLECYKLTKHLLNMEEYQPFKAWW
NT seq 1011 nt   +upstreamnt  +downstreamnt
gtgaagaagaccttttgcctattcaaccccggccggctctcccgccaagacaacaccctc
aagtacaccgcctacgacgaggccggcgccgagggccaaacgcgcttcctgcccatcgaa
gacgtggccgacctctacgtgttcggctcgctcgatgcgaattcagcgctgtataatttt
ctgggcaagcacggcgtgtcggtgcatttcttcgactactacgagcactacaccggctcg
ttcatggccaaggaatacctgctggccggccgcctgcaagtagcccagaccggccactac
accggcctcaacaagcgcctcgtgctggcccgcaagctggtggagggcgcggccttcaac
ctgctcaaaaacctgcgttactaccagagccggggccgggtggtgggcgaggaaattgtg
cagatggagctatacgtatcggccctgccccacgccacgagcgtagccgaaatcatgggc
tacgagggcaatatccggcagacgtactaccgctgcttcgagcaactggtgagcgcgccg
ggctttgccttcggcacccgcagcacccaaccgccccaaaatgagctgaatgcgctcatt
tcgttcggtaacatgctctgctacgcggcctgcctctcgcagatttatcatacgcaactc
aatccgaccatctcatttttgcacgagcctggcacccggcgtttctcgttggccctagat
atggctgagattttcaagcccctgctcgtggaccgcaccattttccggctggtgaacaag
aaggagattcagccccgcgacttcgtgcgcgagctcgacggctgcctgctaaaggagtcg
ggccgcaaaaccttcgtgcgcgtgtttgaggaacgcatgaaagaaaccatccagcaccga
cgcctcaaccgcgccgtgagctatcagcaccttattaagctcgaatgctataagctgacc
aagcacctgctgaacatggaagaatatcaaccctttaaggcctggtggtaa

DBGET integrated database retrieval system